RNA id: TU45824



Basic Information


Item Value
RNA id TU45824
length 234
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G30994
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23266625 ~ 23266858 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggtcaaacaggagcaaacagAGCAACAAGGGAGATCCAGAAGACAAAACGataacaggcaataggtcagtaggcaggcagagaacaatcacagaAACGTATACGGTCAAGGTCGGCAACAGATAATCAAAACAAGAATAAACGCTCGGAATTGCTGTGTAGACAAACAAGATTTTGCGAAGAGTGATCATAGGGAAGTTCATTATAAAGGTTGGGAGTGATGAGAAACACCTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45823 lncRNA downstream 495 23265758 ~ 23266130 (-) True G30993
TU45822 lncRNA downstream 2409 23263732 ~ 23264216 (-) True G30992
TU45790 lncRNA downstream 213005 23051748 ~ 23053620 (-) True G30967
TU45749 lncRNA downstream 405005 22858259 ~ 22861620 (-) False G30938
TU45751 lncRNA downstream 405005 22858259 ~ 22861620 (-) True G30938
TU45844 lncRNA upstream 124821 23391679 ~ 23397273 (-) True G31012
XR_006250676.1 lncRNA upstream 187419 23454277 ~ 23455816 (-) True LOC122343160
TU45858 lncRNA upstream 191869 23458727 ~ 23471751 (-) True G31020
TU45864 lncRNA upstream 207397 23474255 ~ 23474823 (-) True G31024
TU45850 lncRNA upstream 211667 23478525 ~ 23493889 (-) True G31017
XM_043237389.1 mRNA downstream 7306 23256365 ~ 23259319 (-) False LOC122343073
XM_043237390.1 mRNA downstream 7306 23256365 ~ 23259319 (-) True LOC122343073
XM_043236116.1 mRNA downstream 16011 23240075 ~ 23250614 (-) True LOC122342325
XM_043236115.1 mRNA downstream 29545 23230042 ~ 23237080 (-) True LOC122342324
XM_043236114.1 mRNA downstream 47452 23201470 ~ 23219173 (-) True LOC122342323
XM_043236117.1 mRNA upstream 150033 23416891 ~ 23435525 (-) True LOC122342328
XM_043237441.1 mRNA upstream 458894 23725752 ~ 23727918 (-) True LOC122343107
XM_043237481.1 mRNA upstream 549991 23816849 ~ 23929534 (-) True LOC122343128
XM_043237483.1 mRNA upstream 550040 23816898 ~ 23929534 (-) False LOC122343128
XM_043237254.1 mRNA upstream 940797 24207655 ~ 24220008 (-) True LOC122342994
TU45110 other downstream 1021465 22128454 ~ 22245160 (-) True G30450
TU45123 other downstream 1050155 22216035 ~ 22216470 (-) True G30457
TU45011 other downstream 1489819 21629617 ~ 21776806 (-) True G30396
TU44977 other downstream 1526295 21737091 ~ 21740330 (-) True G30372
TU45006 other downstream 1880188 21383469 ~ 21386437 (-) True G30395
TU45768 other upstream 168122 23434980 ~ 23437015 (-) False LOC122342328
TU45855 other upstream 230271 23497129 ~ 23546369 (-) False G31017
TU45890 other upstream 478628 23745486 ~ 23771768 (-) True G31050
TU45934 other upstream 843366 24110224 ~ 24110673 (-) True G31091
TU46017 other upstream 1037238 24304096 ~ 24497596 (-) True G31134

Expression Profile