RNA id: TU45864


Basic Information

Item Value
RNA id TU45864
length 289
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G31024
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23474255 ~ 23474823 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aactgttgATTATTTATCAGAAGACTTCATCTGGTTCTCAGCAAAACCCAATCATGCTGATCACGAGTCTGCTGCTGATGTGGTGGTACTCCACCAGAATGAAGAAAGATTCACCCAATATAATGAACTTGGAGGAGAACAAAGAAGTGTCTGAGACCACCAAAGTCTCTGAGACCGGTCTTCAGACCAGAACTGCCTATGAAGCTAACTCTGTCTCTGAGACTGACACTCTCTCTTAAACTGGCGCTGCCTCATAGACCAGCACTGCCTCTCAAATGGACACTGCAAC

Function

GO:

id name namespace
GO:0005515 protein binding molecular_function
GO:0046982 protein heterodimerization activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
ko05203 Viral carcinogenesis
ko05322 Systemic lupus erythematosus
ko05034 Alcoholism

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45858 lncRNA downstream 2504 23458727 ~ 23471751 (-) True G31020
XR_006250676.1 lncRNA downstream 18439 23454277 ~ 23455816 (-) True LOC122343160
TU45844 lncRNA downstream 76982 23391679 ~ 23397273 (-) True G31012
TU45824 lncRNA downstream 207397 23266625 ~ 23266858 (-) True G30994
TU45823 lncRNA downstream 208125 23265758 ~ 23266130 (-) True G30993
TU45850 lncRNA upstream 3702 23478525 ~ 23493889 (-) True G31017
TU45851 lncRNA upstream 11791 23486614 ~ 23489938 (-) False G31017
XR_006250712.1 lncRNA upstream 19503 23494326 ~ 23496751 (-) True LOC122343190
XR_006250704.1 lncRNA upstream 199303 23674126 ~ 23675958 (-) False LOC122343181
XR_006250703.1 lncRNA upstream 199303 23674126 ~ 23675868 (-) True LOC122343181
XM_043236117.1 mRNA downstream 38730 23416891 ~ 23435525 (-) True LOC122342328
XM_043237389.1 mRNA downstream 214936 23256365 ~ 23259319 (-) False LOC122343073
XM_043237390.1 mRNA downstream 214936 23256365 ~ 23259319 (-) True LOC122343073
XM_043236116.1 mRNA downstream 223641 23240075 ~ 23250614 (-) True LOC122342325
XM_043236115.1 mRNA downstream 237175 23230042 ~ 23237080 (-) True LOC122342324
XM_043237441.1 mRNA upstream 250929 23725752 ~ 23727918 (-) True LOC122343107
XM_043237481.1 mRNA upstream 342026 23816849 ~ 23929534 (-) True LOC122343128
XM_043237483.1 mRNA upstream 342075 23816898 ~ 23929534 (-) False LOC122343128
XM_043237254.1 mRNA upstream 732832 24207655 ~ 24220008 (-) True LOC122342994
XM_043237510.1 mRNA upstream 790526 24265349 ~ 24266607 (-) True LOC122343156
TU45768 other downstream 37240 23434980 ~ 23437015 (-) False LOC122342328
TU45110 other downstream 1229095 22128454 ~ 22245160 (-) True G30450
TU45123 other downstream 1257785 22216035 ~ 22216470 (-) True G30457
TU45011 other downstream 1697449 21629617 ~ 21776806 (-) True G30396
TU45855 other upstream 22306 23497129 ~ 23546369 (-) False G31017
TU45890 other upstream 270663 23745486 ~ 23771768 (-) True G31050
TU45934 other upstream 635401 24110224 ~ 24110673 (-) True G31091
TU46017 other upstream 829273 24304096 ~ 24497596 (-) True G31134
TU45989 other upstream 831678 24306501 ~ 24495178 (-) True G31120

Expression Profile