RNA id: TU45925



Basic Information


Item Value
RNA id TU45925
length 308
lncRNA type inter_gene
GC content 0.61
exon number 2
gene id G31082
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24100450 ~ 24100867 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCCTTGAGCCGTCGAGGGGAGCGTCTCTCAGCTCGTcgctccttctcctcctcctcatctgcAGCCTCCTCCTCTGCACCTCCGATGCCTTCATCCACGTCCTCGGGGTCAGGGGCTTCTGGGTAGAGCCTGTGaacgccGGTCAGAGACGCTCCGGACTGGAAGAGCTCGTACGGATACAGGATCCTCTCAAAGTGAGAGCGCAGCAGAGAGCCCACGCACTTCCCGGCAGGAAAGCCCATACGACTGCTGATCCTGGACCAGCGCTTCTCCTTACAGACCACCTCGAAGCCTCCTTCTGCAGACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45912 lncRNA downstream 63699 24036349 ~ 24036751 (-) True G31072
TU45903 lncRNA downstream 90400 24003692 ~ 24010050 (-) True G31063
TU45902 lncRNA downstream 90835 24002866 ~ 24009615 (-) True G31062
TU45904 lncRNA downstream 93248 24006244 ~ 24007202 (-) True G31064
XR_006250709.1 lncRNA downstream 94214 24004973 ~ 24006236 (-) True LOC122343187
TU45933 lncRNA upstream 21945 24122812 ~ 24125661 (-) True G31090
TU45931 lncRNA upstream 26080 24126947 ~ 24127908 (-) True G31088
XR_006250687.1 lncRNA upstream 111200 24212067 ~ 24215572 (-) False LOC122343167
XR_006250686.1 lncRNA upstream 111200 24212067 ~ 24215572 (-) True LOC122343167
XR_006250685.1 lncRNA upstream 111200 24212067 ~ 24215369 (-) False LOC122343167
XM_043237481.1 mRNA downstream 170916 23816849 ~ 23929534 (-) True LOC122343128
XM_043237483.1 mRNA downstream 170916 23816898 ~ 23929534 (-) False LOC122343128
XM_043237441.1 mRNA downstream 372532 23725752 ~ 23727918 (-) True LOC122343107
XM_043236117.1 mRNA downstream 664925 23416891 ~ 23435525 (-) True LOC122342328
XM_043237390.1 mRNA downstream 841131 23256365 ~ 23259319 (-) True LOC122343073
XM_043237254.1 mRNA upstream 106788 24207655 ~ 24220008 (-) True LOC122342994
XM_043237510.1 mRNA upstream 164482 24265349 ~ 24266607 (-) True LOC122343156
XM_043236125.1 mRNA upstream 211975 24312842 ~ 24319112 (-) True LOC122342338
XM_043236128.1 mRNA upstream 224521 24325388 ~ 24327263 (-) True LOC122342340
XM_043237349.1 mRNA upstream 376129 24476996 ~ 24479914 (-) True ckap4
TU45890 other downstream 328682 23745486 ~ 23771768 (-) True G31050
TU45855 other downstream 554081 23497129 ~ 23546369 (-) False G31017
TU45768 other downstream 663435 23434980 ~ 23437015 (-) False LOC122342328
TU45110 other downstream 1855290 22128454 ~ 22245160 (-) True G30450
TU45934 other upstream 9357 24110224 ~ 24110673 (-) True G31091
TU46017 other upstream 203229 24304096 ~ 24497596 (-) True G31134
TU45989 other upstream 205634 24306501 ~ 24495178 (-) True G31120
TU46025 other upstream 223103 24323970 ~ 24327232 (-) False LOC122342340
TU46026 other upstream 224917 24325784 ~ 24327232 (-) False LOC122342340

Expression Profile