RNA id: TU46110


Basic Information

Item Value
RNA id TU46110
length 642
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G31199
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24710784 ~ 24711425 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTTGTACTAACGGCAGAACTGAAGTTAGAGAATCATTCACAGTAATCCCGGTCTCTACGACTTTATTCACTTTGTCAACATGATTCAAAAATATCACTATTGCGCTATTCATTCTAGACGCAGACAGAATGCAATCATGACCAACAACAGCGGCAACAGCGAGTACACAGTCCTCAACCGAACACCGCTCTGCCGGCATCACCTTAACTCCATGACTACGCGTTAAACTCTCAAAACTCACGTGCTGAGACGCCGCCATAGCGATCAGTACAAACTGACCGATGACGCTCCTCACACAcacgaaaacaaacaaaaaccacaacAGATAGGAAAAAGGGAAAGATTGAAAACTCACTCGAACCGTGGAACTCACTCCAACTCACGCACACCAACTCCGCCCACtcactcccagcatgcactcagagacagagagagagagagaaagagagacagagagagacagagacagagagagagagagagagagacagagagagagacagagagagagagagagagagagacagagagagagagagagagagagagagacagagagagagacagagagagagcgagagagagagaggcagagagagagacagagagacagagagagagagagagagacagagagagaga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46105 lncRNA downstream 404 24697907 ~ 24710380 (-) True G31194
TU46102 lncRNA downstream 22652 24687528 ~ 24688132 (-) True G31192
TU46065 lncRNA downstream 27702 24553418 ~ 24683082 (-) True G31165
TU46111 lncRNA upstream 162 24711587 ~ 24711794 (-) True G31200
TU46112 lncRNA upstream 3027 24714452 ~ 24714777 (-) True G31201
TU46132 lncRNA upstream 270901 24982326 ~ 24982689 (-) True G31221
TU46133 lncRNA upstream 271663 24983088 ~ 24983329 (-) True G31222
TU46136 lncRNA upstream 470588 25182013 ~ 25182344 (-) True G31225
XM_043237376.1 mRNA downstream 79478 24627064 ~ 24631306 (-) False LOC122343065
XM_043237383.1 mRNA downstream 80068 24627064 ~ 24630716 (-) False LOC122343065
XM_043237377.1 mRNA downstream 80068 24627064 ~ 24630716 (-) True LOC122343065
XM_043237380.1 mRNA downstream 80068 24627064 ~ 24630716 (-) False LOC122343065
XM_043237379.1 mRNA downstream 80068 24627064 ~ 24630716 (-) False LOC122343065
XM_043236177.1 mRNA upstream 42631 24754056 ~ 24759307 (-) True LOC122342407
XM_043236132.1 mRNA upstream 252549 24963974 ~ 24981623 (-) True LOC122342349
XM_043236134.1 mRNA upstream 320709 25032134 ~ 25034674 (-) True LOC122342351
XM_043236135.1 mRNA upstream 775763 25487188 ~ 25496806 (-) True LOC122342354
XM_043236417.1 mRNA upstream 843359 25554784 ~ 25567493 (-) False irf10
TU46017 other downstream 213188 24304096 ~ 24497596 (-) True G31134
TU45989 other downstream 215606 24306501 ~ 24495178 (-) True G31120
TU46025 other downstream 383552 24323970 ~ 24327232 (-) False LOC122342340
TU46026 other downstream 383552 24325784 ~ 24327232 (-) False LOC122342340
TU46027 other downstream 383552 24326795 ~ 24327232 (-) False LOC122342340
TU46123 other upstream 47575 24759000 ~ 24760786 (-) False LOC122342407
XR_006250852.1 other upstream 640564 25351989 ~ 25352153 (-) True LOC122343864
XR_006250869.1 other upstream 640974 25352399 ~ 25352587 (-) True LOC122343882
XR_006250841.1 other upstream 642496 25353921 ~ 25354084 (-) True LOC122343852
XR_006250860.1 other upstream 642912 25354337 ~ 25354527 (-) True LOC122343873

Expression Profile