RNA id: TU46111


Basic Information

Item Value
RNA id TU46111
length 208
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G31200
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24711587 ~ 24711794 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTGATCTGAATTGGTAGATAATTCATCTGTATTATGACTCTGATCTGCATTTTTCTCAGGACACACACGTATTACATGGCCCTCACCTCCACACCTGAAACACTTCATAGACTCCGAGGTAGCAAAGATGACATAGTCAAAGTTCTCGATCCTGAACTTCATGGCTAAATTTATCTCTTCGTTCTGGTTGTTTAGAATCATATGCAC

Function

GO:

id name namespace
GO:0004359 glutaminase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46110 lncRNA downstream 162 24710784 ~ 24711425 (-) True G31199
TU46105 lncRNA downstream 1207 24697907 ~ 24710380 (-) True G31194
TU46102 lncRNA downstream 23455 24687528 ~ 24688132 (-) True G31192
TU46063 lncRNA downstream 28505 24553448 ~ 24683082 (-) False G31165
TU46112 lncRNA upstream 2658 24714452 ~ 24714777 (-) True G31201
TU46132 lncRNA upstream 270532 24982326 ~ 24982689 (-) True G31221
TU46133 lncRNA upstream 271294 24983088 ~ 24983329 (-) True G31222
TU46136 lncRNA upstream 470219 25182013 ~ 25182344 (-) True G31225
TU46140 lncRNA upstream 603396 25315190 ~ 25315569 (-) True G31229
XM_043237376.1 mRNA downstream 80281 24627064 ~ 24631306 (-) False LOC122343065
XM_043237383.1 mRNA downstream 80871 24627064 ~ 24630716 (-) False LOC122343065
XM_043237377.1 mRNA downstream 80871 24627064 ~ 24630716 (-) True LOC122343065
XM_043237380.1 mRNA downstream 80871 24627064 ~ 24630716 (-) False LOC122343065
XM_043237379.1 mRNA downstream 80871 24627064 ~ 24630716 (-) False LOC122343065
XM_043236177.1 mRNA upstream 42262 24754056 ~ 24759307 (-) True LOC122342407
XM_043236132.1 mRNA upstream 252180 24963974 ~ 24981623 (-) True LOC122342349
XM_043236134.1 mRNA upstream 320340 25032134 ~ 25034674 (-) True LOC122342351
XM_043236135.1 mRNA upstream 775394 25487188 ~ 25496806 (-) True LOC122342354
XM_043236417.1 mRNA upstream 842990 25554784 ~ 25567493 (-) False irf10
TU46017 other downstream 213991 24304096 ~ 24497596 (-) True G31134
TU45989 other downstream 216409 24306501 ~ 24495178 (-) True G31120
TU46025 other downstream 384355 24323970 ~ 24327232 (-) False LOC122342340
TU46026 other downstream 384355 24325784 ~ 24327232 (-) False LOC122342340
TU46027 other downstream 384355 24326795 ~ 24327232 (-) False LOC122342340
TU46123 other upstream 47206 24759000 ~ 24760786 (-) False LOC122342407
XR_006250852.1 other upstream 640195 25351989 ~ 25352153 (-) True LOC122343864
XR_006250869.1 other upstream 640605 25352399 ~ 25352587 (-) True LOC122343882
XR_006250841.1 other upstream 642127 25353921 ~ 25354084 (-) True LOC122343852
XR_006250860.1 other upstream 642543 25354337 ~ 25354527 (-) True LOC122343873

Expression Profile