RNA id: TU46136



Basic Information


Item Value
RNA id TU46136
length 222
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G31225
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25182013 ~ 25182344 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


aaaaaacatcactgaccctTCAGGAGCAAATCCAGaggcttctcctgcagcagcagctatggagaacagcccagcagaaaaaccagctaaacacaagaagaaaagcctttgtGCATTCTTCAAGAAGACATGGCTTGCTGTGAAAAGCACTCGTCGAGGCAACAAAACAGCCCCTCCTCAGCTTGTGACGGACacagattcagctgatcttcagtGTGGTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46133 lncRNA downstream 198684 24983088 ~ 24983329 (-) True G31222
TU46132 lncRNA downstream 199324 24982326 ~ 24982689 (-) True G31221
TU46112 lncRNA downstream 467236 24714452 ~ 24714777 (-) True G31201
TU46111 lncRNA downstream 470219 24711587 ~ 24711794 (-) True G31200
TU46110 lncRNA downstream 470588 24710784 ~ 24711425 (-) True G31199
TU46140 lncRNA upstream 132846 25315190 ~ 25315569 (-) True G31229
TU46148 lncRNA upstream 166030 25348374 ~ 25348645 (-) True G31237
TU46172 lncRNA upstream 253762 25436106 ~ 25437120 (-) True G31250
TU46175 lncRNA upstream 280809 25463153 ~ 25463544 (-) True G31253
TU46281 lncRNA upstream 452604 25634948 ~ 25635148 (-) True G31335
XM_043236134.1 mRNA downstream 147339 25032134 ~ 25034674 (-) True LOC122342351
XM_043236132.1 mRNA downstream 200390 24963974 ~ 24981623 (-) True LOC122342349
XM_043236177.1 mRNA downstream 422706 24754056 ~ 24759307 (-) True LOC122342407
XM_043237378.1 mRNA downstream 551297 24627064 ~ 24630716 (-) False LOC122343065
XM_043236135.1 mRNA upstream 304844 25487188 ~ 25496806 (-) True LOC122342354
XM_043236417.1 mRNA upstream 372440 25554784 ~ 25567493 (-) False irf10
XM_043236416.1 mRNA upstream 372440 25554784 ~ 25567493 (-) True irf10
XM_043236421.1 mRNA upstream 428271 25610615 ~ 25625124 (-) True samhd1
XM_043236423.1 mRNA upstream 444263 25626607 ~ 25629375 (-) True mtg2
TU46123 other downstream 421227 24759000 ~ 24760786 (-) False LOC122342407
TU45989 other downstream 686835 24306501 ~ 24495178 (-) True G31120
XR_006250852.1 other upstream 169645 25351989 ~ 25352153 (-) True LOC122343864
XR_006250869.1 other upstream 170055 25352399 ~ 25352587 (-) True LOC122343882
XR_006250841.1 other upstream 171577 25353921 ~ 25354084 (-) True LOC122343852
XR_006250860.1 other upstream 171993 25354337 ~ 25354527 (-) True LOC122343873
XR_006250856.1 other upstream 173584 25355928 ~ 25356088 (-) True LOC122343868