Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU46348 |
| length | 261 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G31390 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 25915697 ~ 25915957 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0060606 | tube closure | biological_process |
| GO:0001843 | neural tube closure | biological_process |
| GO:0014020 | primary neural tube formation | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46342 | lncRNA | downstream | 100472 | 25813904 ~ 25815225 (-) | True | G31387 |
| TU46340 | lncRNA | downstream | 102082 | 25812640 ~ 25813615 (-) | True | G31385 |
| TU46336 | lncRNA | downstream | 127822 | 25787380 ~ 25787875 (-) | True | G31381 |
| TU46298 | lncRNA | downstream | 212630 | 25702270 ~ 25703067 (-) | True | G31352 |
| TU46297 | lncRNA | downstream | 217940 | 25697430 ~ 25697757 (-) | True | G31351 |
| XR_006250768.1 | lncRNA | upstream | 2854 | 25918811 ~ 25919410 (-) | True | LOC122343400 |
| XR_006250568.1 | lncRNA | upstream | 104591 | 26020548 ~ 26021384 (-) | True | LOC122342449 |
| TU46357 | lncRNA | upstream | 321963 | 26237920 ~ 26238238 (-) | True | G31399 |
| XR_006250605.1 | lncRNA | upstream | 387705 | 26303662 ~ 26304672 (-) | True | LOC122342589 |
| TU46360 | lncRNA | upstream | 512195 | 26428152 ~ 26433786 (-) | True | G31402 |
| XM_043237668.1 | mRNA | downstream | 137176 | 25762532 ~ 25778521 (-) | True | hm13 |
| XM_043237669.1 | mRNA | downstream | 137178 | 25762532 ~ 25778519 (-) | False | hm13 |
| XM_043236861.1 | mRNA | downstream | 154092 | 25741596 ~ 25761605 (-) | True | si:ch73-181d5.4 |
| XM_043236266.1 | mRNA | downstream | 174444 | 25728094 ~ 25741253 (-) | False | LOC122342461 |
| XM_043236267.1 | mRNA | downstream | 174784 | 25728094 ~ 25740913 (-) | True | LOC122342461 |
| XM_043236136.1 | mRNA | upstream | 36803 | 25952760 ~ 25955621 (-) | True | LOC122342356 |
| XM_043236138.1 | mRNA | upstream | 106187 | 26022144 ~ 26023244 (-) | True | LOC122342358 |
| XM_043236140.1 | mRNA | upstream | 107980 | 26023937 ~ 26026107 (-) | True | LOC122342359 |
| XM_043236143.1 | mRNA | upstream | 774027 | 26689984 ~ 26691677 (-) | True | LOC122342363 |
| XM_043236144.1 | mRNA | upstream | 776664 | 26692621 ~ 26693546 (-) | True | LOC122342364 |
| TU46256 | other | downstream | 354499 | 25559040 ~ 25561198 (-) | True | G31314 |
| XR_006250868.1 | other | downstream | 528880 | 25386628 ~ 25386817 (-) | True | LOC122343881 |
| XR_006250847.1 | other | downstream | 529323 | 25386213 ~ 25386374 (-) | True | LOC122343859 |
| XR_006250865.1 | other | downstream | 530851 | 25384655 ~ 25384846 (-) | True | LOC122343878 |
| XR_006250858.1 | other | downstream | 531292 | 25384248 ~ 25384405 (-) | True | LOC122343871 |
| unassigned_transcript_476 | other | upstream | 65509 | 25981466 ~ 25981546 (-) | True | trnas-uga_31 |
| unassigned_transcript_477 | other | upstream | 68877 | 25984834 ~ 25984906 (-) | True | trnak-uuu_27 |
| unassigned_transcript_478 | other | upstream | 70008 | 25985965 ~ 25986045 (-) | True | trnas-uga_32 |
| unassigned_transcript_479 | other | upstream | 70348 | 25986305 ~ 25986386 (-) | True | trnas-aga_31 |
| unassigned_transcript_480 | other | upstream | 72653 | 25988610 ~ 25988691 (-) | True | trnas-uga_33 |
