Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043236327.1 |
| length | 1265 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC122342494 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 27356812 ~ 27358163 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0046872 | metal ion binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46401 | lncRNA | upstream | 123380 | 27233096 ~ 27233432 (+) | True | G31438 |
| TU46389 | lncRNA | upstream | 158546 | 27197887 ~ 27198266 (+) | True | G31429 |
| TU46388 | lncRNA | upstream | 272105 | 27084317 ~ 27084707 (+) | True | G31428 |
| TU46387 | lncRNA | upstream | 363458 | 26993034 ~ 26993354 (+) | True | G31427 |
| XR_006250602.1 | lncRNA | upstream | 422461 | 26933340 ~ 26934351 (+) | True | LOC122342584 |
| TU46414 | lncRNA | downstream | 2680 | 27360843 ~ 27406082 (+) | False | LOC122342806 |
| TU46415 | lncRNA | downstream | 2680 | 27360843 ~ 27406082 (+) | False | LOC122342806 |
| TU46428 | lncRNA | downstream | 5425 | 27363588 ~ 27410595 (+) | False | G31443 |
| TU46427 | lncRNA | downstream | 49798 | 27407961 ~ 27410595 (+) | True | G31443 |
| XR_006250747.1 | lncRNA | downstream | 249624 | 27607787 ~ 27619661 (+) | True | LOC122343300 |
| XM_043236149.1 | mRNA | upstream | 146210 | 27207736 ~ 27210602 (+) | True | LOC122342370 |
| XM_043236148.1 | mRNA | upstream | 350506 | 27004701 ~ 27006306 (+) | True | LOC122342369 |
| XM_043236145.1 | mRNA | upstream | 589639 | 26764953 ~ 26767173 (+) | True | LOC122342366 |
| XM_043236142.1 | mRNA | upstream | 929573 | 26382916 ~ 26427239 (+) | True | LOC122342362 |
| XM_043236141.1 | mRNA | upstream | 1179194 | 26173194 ~ 26177618 (+) | True | LOC122342360 |
| XM_043236150.1 | mRNA | downstream | 5855 | 27364018 ~ 27371196 (+) | True | LOC122342372 |
| XM_043236921.1 | mRNA | downstream | 32176 | 27390339 ~ 27406088 (+) | True | LOC122342806 |
| XM_043236927.1 | mRNA | downstream | 32176 | 27390339 ~ 27406088 (+) | False | LOC122342806 |
| XM_043236924.1 | mRNA | downstream | 32176 | 27390339 ~ 27406088 (+) | False | LOC122342806 |
| XM_043236923.1 | mRNA | downstream | 32176 | 27390339 ~ 27406088 (+) | False | LOC122342806 |
| unassigned_transcript_953 | other | upstream | 132826 | 27223914 ~ 27223986 (+) | True | trnav-uac_5 |
| unassigned_transcript_952 | other | upstream | 215188 | 27141552 ~ 27141624 (+) | True | trnav-aac_9 |
| unassigned_transcript_951 | other | upstream | 217686 | 27139054 ~ 27139126 (+) | True | trnav-cac_2 |
| unassigned_transcript_950 | other | upstream | 218904 | 27137836 ~ 27137908 (+) | True | trnav-aac_8 |
| unassigned_transcript_949 | other | upstream | 219786 | 27136954 ~ 27137026 (+) | True | trnav-aac_7 |
| TU46402 | other | downstream | 8067 | 27366230 ~ 27367990 (+) | False | LOC122342372 |
| TU46403 | other | downstream | 8188 | 27366351 ~ 27367990 (+) | False | LOC122342372 |
| TU46683 | other | downstream | 848795 | 28206958 ~ 28216248 (+) | True | G31614 |
| TU46688 | other | downstream | 860570 | 28218733 ~ 28221417 (+) | True | G31619 |
| TU46717 | other | downstream | 926864 | 28285027 ~ 28320694 (+) | False | G31636 |
