Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU46445 |
| length | 848 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC122343300 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 27607787 ~ 27619661 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU46428 | lncRNA | upstream | 197192 | 27363588 ~ 27410595 (+) | False | G31443 |
| TU46427 | lncRNA | upstream | 197192 | 27407961 ~ 27410595 (+) | True | G31443 |
| TU46414 | lncRNA | upstream | 201705 | 27360843 ~ 27406082 (+) | False | LOC122342806 |
| TU46415 | lncRNA | upstream | 201705 | 27360843 ~ 27406082 (+) | False | LOC122342806 |
| TU46404 | lncRNA | upstream | 238605 | 27297536 ~ 27369182 (+) | False | LOC122342372 |
| TU46532 | lncRNA | downstream | 95419 | 27712246 ~ 27713190 (+) | True | G31520 |
| TU46558 | lncRNA | downstream | 181146 | 27797973 ~ 27798209 (+) | True | G31540 |
| TU46561 | lncRNA | downstream | 206579 | 27823406 ~ 27823705 (+) | True | G31543 |
| TU46576 | lncRNA | downstream | 295490 | 27912317 ~ 27951998 (+) | True | G31549 |
| TU46577 | lncRNA | downstream | 295490 | 27912317 ~ 27951998 (+) | False | G31549 |
| XM_043237688.1 | mRNA | upstream | 8529 | 27460515 ~ 27599258 (+) | True | pvrl2l |
| XM_043237687.1 | mRNA | upstream | 64544 | 27460481 ~ 27543243 (+) | False | pvrl2l |
| XM_043237111.1 | mRNA | upstream | 165587 | 27436433 ~ 27442200 (+) | True | tcf19l |
| XM_043237110.1 | mRNA | upstream | 171759 | 27419543 ~ 27436028 (+) | True | LOC122342913 |
| XM_043236926.1 | mRNA | upstream | 201699 | 27390339 ~ 27406088 (+) | False | LOC122342806 |
| XM_043237686.1 | mRNA | downstream | 5845 | 27622672 ~ 27649545 (+) | True | atp1a3a |
| XM_043236227.1 | mRNA | downstream | 48278 | 27665105 ~ 27711406 (+) | True | LOC122342440 |
| XM_043236229.1 | mRNA | downstream | 48278 | 27665105 ~ 27711406 (+) | False | LOC122342440 |
| XM_043236228.1 | mRNA | downstream | 48278 | 27665105 ~ 27711406 (+) | False | LOC122342440 |
| XM_043236230.1 | mRNA | downstream | 48278 | 27665105 ~ 27711406 (+) | False | LOC122342440 |
| TU46402 | other | upstream | 239797 | 27366230 ~ 27367990 (+) | False | LOC122342372 |
| TU46403 | other | upstream | 239797 | 27366351 ~ 27367990 (+) | False | LOC122342372 |
| TU46406 | other | upstream | 249640 | 27357443 ~ 27358147 (+) | False | LOC122342494 |
| unassigned_transcript_953 | other | upstream | 383801 | 27223914 ~ 27223986 (+) | True | trnav-uac_5 |
| unassigned_transcript_952 | other | upstream | 466163 | 27141552 ~ 27141624 (+) | True | trnav-aac_9 |
| TU46683 | other | downstream | 590131 | 28206958 ~ 28216248 (+) | True | G31614 |
| TU46688 | other | downstream | 601906 | 28218733 ~ 28221417 (+) | True | G31619 |
| TU46717 | other | downstream | 668200 | 28285027 ~ 28320694 (+) | False | G31636 |
| TU46718 | other | downstream | 668200 | 28285027 ~ 28320694 (+) | True | G31636 |
| TU46723 | other | downstream | 683200 | 28300027 ~ 28301346 (+) | False | LOC122342379 |
