RNA id: TU46723



Basic Information


Item Value
RNA id TU46723
length 502
RNA type TUCP
GC content 0.55
exon number 2
gene id LOC122342379
representative False

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28297302 ~ 28317582 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GATTGGCTGAGGAGCAGAAACTGAGGAACCAGATGAGCGCGAGGAAAGCCAAAGAAGAAGCCGAGAAGAAGCACCAGGAGCGCCTGGCGCAGCTGGCTCGAGAAGACGCAGAGCGTGAGAGGAAGGAGCGAGAGGAGGCCCGGAGGAAAAAGGAGATGCTGGACCAGATGGAGAAAGCTCGGCACGAACCGGTCAACGACTCTGATATGGTGGACAAGATGTTCGGCTTCTGGGGACCACTAACTCCTTCCTGACAGGAGGGTCAAGCTCCGGCTGGGTTTGAGGACCTGGAGCGAACGCACAGGGAAATCGAGGAGGAAGACCTGGATGAAGCTCTTCCTCTCCCGGAAGATGATTTGGAAGATTTGTCGGAGTATAAATTTGCCAAGTTCTCTGCCACGTATTTCCAGGGCACGAGCACACACACTTACGTGCGCCGGCCGCTCAAACAGCCCTTACTGTTTCACGAAGACGAAGGAGATCAGCTGGTACGTGACCTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46711 lncRNA upstream 29443 28270102 ~ 28270584 (+) True G31631
TU46694 lncRNA upstream 71726 28226400 ~ 28228301 (+) False G31621
TU46588 lncRNA downstream 71039 28372385 ~ 28375787 (+) False G31551
TU46585 lncRNA downstream 72138 28373484 ~ 28375787 (+) True G31551
TU46586 lncRNA downstream 72138 28373484 ~ 28375787 (+) False G31551
XR_006250633.1 lncRNA downstream 79266 28380612 ~ 28385954 (+) True LOC122342705
TU46742 lncRNA downstream 219638 28520984 ~ 28541933 (+) True G31653
XM_043236151.1 mRNA upstream 99016 28197236 ~ 28201011 (+) True LOC122342376
XM_043236236.1 mRNA upstream 189980 28106617 ~ 28110047 (+) True LOC122342444
XM_043236671.1 mRNA upstream 217057 28080859 ~ 28082970 (+) True krt91
XM_043237699.1 mRNA upstream 335803 27953450 ~ 27964224 (+) False si:ch211-264f5.2
XM_043237531.1 mRNA downstream 53084 28354430 ~ 28360242 (+) True dhdh.1
XM_043236221.1 mRNA downstream 59600 28360946 ~ 28367478 (+) False dhdh.2
XM_043236222.1 mRNA downstream 59600 28360946 ~ 28367455 (+) True dhdh.2
XM_043237898.1 mRNA downstream 86161 28387507 ~ 28410310 (+) True LOC122343436
XM_043237901.1 mRNA downstream 86161 28387507 ~ 28410310 (+) False LOC122343436
TU46688 other upstream 78610 28218733 ~ 28221417 (+) True G31619
TU46683 other upstream 83779 28206958 ~ 28216248 (+) True G31614
TU46402 other upstream 932037 27366230 ~ 27367990 (+) False LOC122342372
TU46403 other upstream 932037 27366351 ~ 27367990 (+) False LOC122342372
TU46406 other upstream 941880 27357443 ~ 27358147 (+) False LOC122342494
TU46708 other downstream 1061 28302407 ~ 28302897 (+) False LOC122342379
TU46732 other downstream 49007 28350353 ~ 28353226 (+) True G31649
TU46990 other downstream 529294 28830640 ~ 28893627 (+) False LOC122343276
TU46989 other downstream 585807 28887153 ~ 28893627 (+) False LOC122343276
TU46991 other downstream 585807 28887153 ~ 28893627 (+) True LOC122343276

Expression Profile