RNA id: TU46844



Basic Information


Item Value
RNA id TU46844
length 207
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G31736
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28080175 ~ 28080381 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


atctatctatctatctatctatctatcctctTGGAATTATAAGGTTCTATCTGATAACTTTTGTCAAAACTTTGGttagtttttttgcatattttttattctgtgagAACTTATTAACATTACGTGAtagattttataatgttatgtaCATGTCGGGAGTTgttattgaaaaaacaaaaaggctcTCTCTGCACAGTTGAATGGAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46834 lncRNA downstream 137371 27941679 ~ 27942804 (-) True G31728
TU46829 lncRNA downstream 156999 27920620 ~ 27923176 (-) True G31723
TU46821 lncRNA downstream 175492 27898767 ~ 27904683 (-) True G31718
TU46788 lncRNA downstream 259922 27820024 ~ 27820253 (-) True G31692
TU46516 lncRNA downstream 430630 27636278 ~ 27649545 (-) False G31507
TU46847 lncRNA upstream 15513 28095894 ~ 28096491 (-) True G31737
TU46868 lncRNA upstream 39869 28120250 ~ 28121160 (-) False LOC122342471
XR_006250577.1 lncRNA upstream 46833 28127214 ~ 28129808 (-) True LOC122342474
TU46888 lncRNA upstream 146033 28226414 ~ 28228301 (-) True G31759
TU46889 lncRNA upstream 146033 28226414 ~ 28228301 (-) False G31759
XM_043237797.1 mRNA downstream 12424 28065567 ~ 28067751 (-) False eif1
XM_043237153.1 mRNA downstream 42475 27981070 ~ 28037700 (-) False jupb
XM_043237154.1 mRNA downstream 42475 27981070 ~ 28037700 (-) True jupb
XM_043237704.1 mRNA downstream 103000 27969910 ~ 27977175 (-) True wipf2b
XM_043237697.1 mRNA downstream 110406 27966309 ~ 27969769 (-) False LOC122343310
XM_043236290.1 mRNA upstream 33121 28113502 ~ 28118332 (-) False LOC122342469
XM_043236291.1 mRNA upstream 33121 28113502 ~ 28118332 (-) False LOC122342469
XM_043236288.1 mRNA upstream 33121 28113502 ~ 28118332 (-) True LOC122342469
XM_043236289.1 mRNA upstream 33121 28113502 ~ 28117620 (-) False LOC122342469
XM_043236292.1 mRNA upstream 33121 28113502 ~ 28117589 (-) False LOC122342469
TU46793 other downstream 12413 28065297 ~ 28067762 (-) True eif1
TU46518 other downstream 435443 27642692 ~ 27644732 (-) True G31508
TU46508 other downstream 464234 27539355 ~ 27615941 (-) True G31503
TU46510 other downstream 527582 27539355 ~ 27552593 (-) False G31503
TU46464 other downstream 693757 27385805 ~ 27386418 (-) False LOC122342454
TU46883 other upstream 104949 28185330 ~ 28186778 (-) False LOC122342472
TU46919 other upstream 283644 28364025 ~ 28365196 (-) True G31776
TU47051 other upstream 763812 28844193 ~ 28846421 (-) True G31868
TU47079 other upstream 892972 28973353 ~ 29012765 (-) True G31890

Expression Profile