RNA id: TU46974


Basic Information

Item Value
RNA id TU46974
length 302
lncRNA type inter_gene
GC content 0.55
exon number 2
gene id G31815
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28658370 ~ 28664428 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTCAGGCAGCCATCCAGGCCATGAGCGGCTTTCAGATCGGCATGAAGAGGCTCAAAGTCCAGCTGAAGCGGCCCAAGGACGCCAACCGGCCGTACTGACCCTGACTGACCCTGACTGGCCCCTGCTCCTTCACTCACAGgatgAAGGACGACGACCTCTTATTTCCACAAGTGCAGTATCAAAAGACTTTTGCTCTGCTACATATCACGGGAGGCGAGCGAGTCCCGGGGTTTTACCGGAGAATCAGCCGGAAGAGAGCCGGAAGAACCggaaggctttttttttctgccaactTTCTTCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46976 lncRNA downstream 5537 28646972 ~ 28652833 (-) True G31816
TU46966 lncRNA downstream 109444 28546475 ~ 28548926 (-) True G31808
TU46967 lncRNA downstream 109444 28546475 ~ 28548926 (-) False G31808
TU46954 lncRNA downstream 116621 28523638 ~ 28541749 (-) True G31798
TU46962 lncRNA downstream 132038 28522554 ~ 28526332 (-) True G31804
TU47048 lncRNA upstream 175535 28839963 ~ 29039521 (-) True G31865
TU47050 lncRNA upstream 177482 28841910 ~ 28842439 (-) True G31867
TU47066 lncRNA upstream 241751 28906179 ~ 28983812 (-) False G31881
TU47068 lncRNA upstream 241751 28906179 ~ 28985530 (-) True G31881
TU47071 lncRNA upstream 243074 28907502 ~ 28910158 (-) True G31883
XM_043236728.1 mRNA downstream 275813 28368455 ~ 28382557 (-) False pkma
XM_043236727.1 mRNA downstream 277756 28368455 ~ 28380614 (-) True pkma
XM_043236726.1 mRNA downstream 277756 28368455 ~ 28380614 (-) False pkma
XM_043237532.1 mRNA downstream 445323 28212246 ~ 28213047 (-) True LOC122343218
XM_043236295.1 mRNA downstream 471113 28181566 ~ 28187257 (-) False LOC122342472
XM_043236155.1 mRNA upstream 289920 28954348 ~ 28956291 (-) True LOC122342383
TU46919 other downstream 293174 28364025 ~ 28365196 (-) True G31776
TU46883 other downstream 471592 28185330 ~ 28186778 (-) False LOC122342472
TU46793 other downstream 590608 28065297 ~ 28067762 (-) True eif1
TU46518 other downstream 1013638 27642692 ~ 27644732 (-) True G31508
TU46510 other downstream 1105777 27539355 ~ 27552593 (-) False G31503
TU47051 other upstream 179765 28844193 ~ 28846421 (-) True G31868
TU47079 other upstream 308925 28973353 ~ 29012765 (-) True G31890

Expression Profile