RNA id: XR_006250732.1


Basic Information

Item Value
RNA id XR_006250732.1
length 605
lncRNA type inter_gene
GC content 0.39
exon number 6
gene id LOC122343231
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 29155433 ~ 29165907 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTaatcatcattttaatgtttatacgGGGACATACATGAacataaagagaaaacaaagacattttgagaagaTGTCTAGAAACTGAACGTTTTGATCAAAGCAAGTCTTCagctgtggagcagaaagacacttccttattcatAAGTCAATGACAGAAGATGACGTCGGAGCAGAATCTGGATACAATGGAAGGTGAACATAAATGCTTAGAGGCAAGAGAAAAACAAGATCCAGTCCAGATGAGAAATGCCCGACTACAGTCAGTGTTGATATAAATTCTGAAACAGGTGCGAGTGTAAATGCTCCTCTATTGACTGCGAACACCTTCACAGGACCAGTAACCATTTATGGCTCAAATGCTGAAGGAAACGATAAACAGAAATCCTCAGAGATGGCAGAggaacacagagaaaaacaagagctgcaaaactttttggaaactcacaaaacaaacatgaaggagaaaaacagaatatatttttgaggGCAACAAAGACAAGGAAGCACAACTCAAGGCTGTTTACACAGatctgttcatcacagaggGAGATATGAAAGATGTCAATCACGAACATGAGATTCTGAAGATTGATGATGCTTTCAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47005 lncRNA upstream 110647 29034255 ~ 29044792 (+) True LOC122342386
TU47028 lncRNA upstream 129546 29006637 ~ 29025893 (+) True G31848
TU47027 lncRNA upstream 130837 29005282 ~ 29024602 (+) True G31847
TU47024 lncRNA upstream 131584 29003796 ~ 29023855 (+) True G31846
TU47023 lncRNA upstream 152462 28997728 ~ 29002977 (+) True G31845
XM_043236158.1 mRNA upstream 120912 29005765 ~ 29034527 (+) False LOC122342386
XM_043236156.1 mRNA upstream 162322 28970251 ~ 28993117 (+) True LOC122342385
XM_043236154.1 mRNA upstream 560444 28593877 ~ 28594995 (+) True LOC122342381
XM_043237684.1 mRNA upstream 618107 28421249 ~ 28537332 (+) False celf6
TU46990 other upstream 261812 28830640 ~ 28893627 (+) False LOC122343276
TU46989 other upstream 261812 28887153 ~ 28893627 (+) False LOC122343276
TU46991 other upstream 261812 28887153 ~ 28893627 (+) True LOC122343276
TU46732 other upstream 802213 28350353 ~ 28353226 (+) True G31649
TU46708 other upstream 852542 28302407 ~ 28302897 (+) False LOC122342379