RNA id: TU47048


Basic Information

Item Value
RNA id TU47048
length 363
lncRNA type sense_over
GC content 0.44
exon number 2
gene id G31865
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28839963 ~ 29039521 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTCAACTGAGACTGCCCTGCTTTTGGTCGTTAAAAGTCTGTGAGTGGCAAGATCAGCTTCTAAGTCATCTGTTCTCATTTTGCTGGATCTCTCTGCGGCTTTTGGCACAGTTATCCACCTGATTGTCCTGTCAACCCTTTTGACAAAAGGTGTCTTAGGAACCTCACTCCTGTGGTTCCAGTCTTAACTCTCAGGTAGGTCCTTTGGGGTGTCTTGGAGGGGGAGGTTTCTAAGAtgcaacatctagctactgcTTGGAGCACTTCTCCTCTCCATGTACATACAGTGGAATGCAACATTTTGGTAATCACTTGCAGAATCTGAAACGTTTGAAAgagtaagatattttacataaaagatgt

Function

GO: NA

KEGG:

id description
ko04142 Lysosome

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46974 lncRNA downstream 175535 28658370 ~ 28664428 (-) True G31815
TU46976 lncRNA downstream 187130 28646972 ~ 28652833 (-) True G31816
TU46966 lncRNA downstream 291037 28546475 ~ 28548926 (-) True G31808
TU46967 lncRNA downstream 291037 28546475 ~ 28548926 (-) False G31808
TU46954 lncRNA downstream 298214 28523638 ~ 28541749 (-) True G31798
XM_043236728.1 mRNA downstream 457406 28368455 ~ 28382557 (-) False pkma
XM_043236727.1 mRNA downstream 459349 28368455 ~ 28380614 (-) True pkma
XM_043236726.1 mRNA downstream 459349 28368455 ~ 28380614 (-) False pkma
XM_043237532.1 mRNA downstream 626916 28212246 ~ 28213047 (-) True LOC122343218
XM_043236295.1 mRNA downstream 652706 28181566 ~ 28187257 (-) False LOC122342472
TU46919 other downstream 474767 28364025 ~ 28365196 (-) True G31776
TU46883 other downstream 653185 28185330 ~ 28186778 (-) False LOC122342472
TU46793 other downstream 772201 28065297 ~ 28067762 (-) True eif1
TU46518 other downstream 1195231 27642692 ~ 27644732 (-) True G31508
TU46510 other downstream 1287370 27539355 ~ 27552593 (-) False G31503

Expression Profile