RNA id: TU47050


Basic Information

Item Value
RNA id TU47050
length 340
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G31867
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28841910 ~ 28842439 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtctgtgtgtgtgagtgtgtgtgtgtctgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgattttgCTCTTTAGATGTTTTAGAGCAGACAATAGGAGAGCAGCCGGTGCCGGGGGCGGGAGTTCCCGATGTGGAGCAGGAAGCTAAGCTTAGCTGCTGCTAAGAGATAGAAGAGGCACTTCCGTCCGAGACACTTTTCGTTCGTGTCTTAAAAACACGAACGGAAGGGAAATGGAGCAGGCTCGATGTGTCTCAATCGTCCTGCAATTGCGGCAGCATTTTTCTCTGAGTGCCGGATCTGTCTGTTTTGATTGTTGAAAATGCCGCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46974 lncRNA downstream 177482 28658370 ~ 28664428 (-) True G31815
TU46976 lncRNA downstream 189077 28646972 ~ 28652833 (-) True G31816
TU46966 lncRNA downstream 292984 28546475 ~ 28548926 (-) True G31808
TU46967 lncRNA downstream 292984 28546475 ~ 28548926 (-) False G31808
TU46954 lncRNA downstream 300161 28523638 ~ 28541749 (-) True G31798
TU47066 lncRNA upstream 63740 28906179 ~ 28983812 (-) False G31881
TU47068 lncRNA upstream 63740 28906179 ~ 28985530 (-) True G31881
TU47071 lncRNA upstream 65063 28907502 ~ 28910158 (-) True G31883
XR_006250629.1 lncRNA upstream 114803 28957242 ~ 28960302 (-) True LOC122342678
TU47076 lncRNA upstream 116084 28958523 ~ 28960254 (-) False LOC122342678
XM_043236728.1 mRNA downstream 459353 28368455 ~ 28382557 (-) False pkma
XM_043236727.1 mRNA downstream 461296 28368455 ~ 28380614 (-) True pkma
XM_043236726.1 mRNA downstream 461296 28368455 ~ 28380614 (-) False pkma
XM_043237532.1 mRNA downstream 628863 28212246 ~ 28213047 (-) True LOC122343218
XM_043236295.1 mRNA downstream 654653 28181566 ~ 28187257 (-) False LOC122342472
XM_043236155.1 mRNA upstream 111909 28954348 ~ 28956291 (-) True LOC122342383
TU46919 other downstream 476714 28364025 ~ 28365196 (-) True G31776
TU46883 other downstream 655132 28185330 ~ 28186778 (-) False LOC122342472
TU46793 other downstream 774148 28065297 ~ 28067762 (-) True eif1
TU46518 other downstream 1197178 27642692 ~ 27644732 (-) True G31508
TU46510 other downstream 1289317 27539355 ~ 27552593 (-) False G31503
TU47051 other upstream 1754 28844193 ~ 28846421 (-) True G31868
TU47079 other upstream 130914 28973353 ~ 29012765 (-) True G31890

Expression Profile