RNA id: XM_043236105.1


Basic Information

Item Value
RNA id XM_043236105.1
length 1614
RNA type mRNA
GC content 0.45
exon number 8
gene id LOC122342313
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22568224 ~ 22577494 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGAGagaaatcaacTTGATGAAGGACAAAACACTCAGTCTTTCAGATCTTCTTCACGTCTTCTTCCCTGAaactaaagaaatggaaatatccagTGATGAATATGaagtgttgttcatctttgatggtctggacgaGTGTCGTCTGTCTCTGGACTTTAAGAaccagcagcatgATCTCGTCCCCTCAGAGTGCGTCCATCGAGTGACAGAGGTACGAGGCTTCAATGAGACACAGAAGGAGGAATACTTCAGGAAGAGGATCAGTGATCAGACCACTGTTCTTGAGAAGATCTTGAGTCGAGCAGAGACTGCAGAGATTCCCAAGActctcactcaaatgtacacacacttcctgatcctTCAGACCAACATCAAACGTGAGAAGGAGTATGAGGAGAAGGTGACAGATGAAGACATGATCCTCAAACTGGGGAAACTGGCTTTCCAGCAGCTAGTGAAAGGAAACCTGATCTTCTATGATGAAGACCTGAGAGAGTGTGGCATTGATGTGACAGAAGCATCAGTTTATTCAGGACTGTGCACTCAAATCTTCAGAGAGGAGCTGGGCTTGTTTCAGGGGAAAGTGTTCTGCTTCGTTCATCTAAGCCTGCAGGAACATTTAGCAGCTCTATATGTGCACCACTCCTTTACAGTCaacaaaatcaatgcatttgATGAAATCAAACAAAGTCTGTTGTCTAAGATTTTGAACCAGATGAAGTATAATTCATTATTGGAGCTGCATCAGAGTGCTTTAGAAATTGCCTTAAAGAGTAAGAATGGACATCTGGACCTTTTTCTGCGGTTTCTTCTGGGTCTCTCAGTGGAGTCCAATCAGACTCTCTTAAGAAAACTACTgacacagacaggaagctgctcctacaacaaagagaaaacagttCAGTTCATTAAACAGAAGATCAGGGAGAATCACTCTTCAGAgaaatccatcaatctgtttcactgtctgaatgaactgggtgatgattcactgatgcaGGAGATCCAGGGTTATCTGAAATCTGGAAAAATAAGAGAAATCAAACTCTCCTCTTCACAGTGGTCAGCTCTGGTTTATGTGTTGCTGACATCAGAGCAGAAGATGGATATTTTTGATCTAAAACAGTTTATTGGAGAACAACACACAGGAGATGAAGTTCTTCAGTATCTGTTACCTGTGGTTAAAGAATGCAGATCAGTTCGTGGGTACACACACCTCCCAGTGCTGGACACCCAGGTGTACGGTATCCCGGATGACGTAGTCAGTGACCGAGGAACACAGTTTACTTCCCAGTACGCCCAGAATTCACTTAACCAATCATCTACAGGTCTCACCCCCTTCCTGTGGTTCCAACCTCCTCTGTTCCTGTGGTCTGGTGAATCCTCCTCAGTCCCTGCGGTGGACGACTGGATTCGTCGGAGTGAGAAGGTGTGGGACAGTGCACATGTCCGTATCCAGCAGGCCATTAGAACACAGGAAATACAGGCCAACAGACAACATCTTACACACCCTCCCTACCAACCAGTGATCCACCCAGATGCTGACCCCAGCCTTGAGGCCCCAGAACCACCACCACATCTAGATATTGATGGGCTCCCACTTATCAGGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU45204 lncRNA downstream 67050 22500162 ~ 22501174 (-) True G30525
TU45195 lncRNA downstream 80055 22487420 ~ 22488169 (-) True G30520
TU45193 lncRNA downstream 81105 22486775 ~ 22487119 (-) True G30518
TU45181 lncRNA downstream 139467 22425592 ~ 22428757 (-) True G30506
TU45173 lncRNA downstream 146271 22359217 ~ 22421953 (-) True G30499
TU45728 lncRNA upstream 193361 22770855 ~ 22772854 (-) True G30920
TU45737 lncRNA upstream 210052 22787546 ~ 22789302 (-) True G30926
TU45749 lncRNA upstream 280765 22858259 ~ 22861620 (-) False G30938
TU45751 lncRNA upstream 280765 22858259 ~ 22861620 (-) True G30938
TU45790 lncRNA upstream 474254 23051748 ~ 23053620 (-) True G30967
XM_043237366.1 mRNA downstream 68695 22495286 ~ 22499529 (-) True LOC122343060
XM_043237275.1 mRNA downstream 136601 22429074 ~ 22431623 (-) True LOC122343006
XM_043237171.1 mRNA downstream 172624 22385863 ~ 22395600 (-) True LOC122342948
XM_043237170.1 mRNA downstream 233431 22325510 ~ 22334793 (-) True LOC122342947
XM_043237479.1 mRNA downstream 248127 22315908 ~ 22320097 (-) True LOC122343126
XM_043236107.1 mRNA upstream 852 22578346 ~ 22585463 (-) True LOC122342314
XM_043237371.1 mRNA upstream 10229 22587723 ~ 22593908 (-) False LOC122343061
XM_043237368.1 mRNA upstream 10229 22587723 ~ 22593907 (-) False LOC122343061
XM_043237369.1 mRNA upstream 10229 22587723 ~ 22593881 (-) True LOC122343061
XM_043237370.1 mRNA upstream 10229 22587723 ~ 22593873 (-) False LOC122343061
TU45110 other downstream 323064 22128454 ~ 22245160 (-) True G30450
TU45123 other downstream 351754 22216035 ~ 22216470 (-) True G30457
TU45011 other downstream 791418 21629617 ~ 21776806 (-) True G30396
TU44977 other downstream 827894 21737091 ~ 21740330 (-) True G30372
TU45006 other downstream 1181787 21383469 ~ 21386437 (-) True G30395
TU45768 other upstream 857486 23434980 ~ 23437015 (-) False LOC122342328
TU45855 other upstream 919635 23497129 ~ 23546369 (-) False G31017
TU45890 other upstream 1167992 23745486 ~ 23771768 (-) True G31050
TU45934 other upstream 1532730 24110224 ~ 24110673 (-) True G31091
TU46017 other upstream 1726602 24304096 ~ 24497596 (-) True G31134

Expression Profile