RNA id: XM_043236162.1


Basic Information

Item Value
RNA id XM_043236162.1
length 1335
RNA type mRNA
GC content 0.42
exon number 6
gene id tmem243b
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 4176998 ~ 4180317 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCGCTTTCATGTAGCGAGTCGTCACAACTGATCTTTTGAAGTCATGCGGATAATGCTCCGATCGGAAAACACCCCCGTGTGATCAATAAATCCCACTGTTTCTCAAATAGGGAGCTGAAAATAGTCTGGAGATCATCATCGTCTTCCATACTTGGATAACTTTTCACACGAGCTGCATCCGGAATTTTTTGACACTATCATAATGAAGATTTGCATCGGTTTGAGAGGTAACCCGACCGTGACTATGTTCTGCTTCTAAATCTCTTGCTGTGAGGAGCAAAACCAACCTAGAGAGCAGCGGACATGCACTGCTGTCCTCCGCTCCAAAGGGGGAGCTGCTGGTAGAAGATATCAGAAAAGGGTGTGTGTATTGCTCTGGCCATGGATGACTTCACTACACGCACCTATGGCACCAGCGGCATGGACAACAGGCCTCTGTTCGGGGAGACGTCGGCCAGGGATAGAATCATCAATCTAGTGATCGGTGGACTCGCGTCTTTACTCGTTCTGGTGACCATCATTAGCTCATTCGTCTTCCCATCTCTTCCTCCCAAGCCATTGAATATATTCTTTGCCATCTGTATCATGCTAGTCTGCGGTTCAGTGTTGGTTCTGATATACTGGTATAGGCAAGGAGATCTGGAGCCCAAGTTTCGCAACTTGATCTACTACATGCTCTGTTCCATCGTTCTGCTGTGTATCTGTGCCAACTTGTATTTCCATGATGTTGGACGTGATAAACAGAGCAATGCCTTATAATGCTGTTTCCACGGGAGCCGTCGCAATCAGCGGAATGTTCATCATTATGTGGGTGCTTTGGAACCCCACATAACTCCATTCGAGTTCTTCAATCAGGAGAATTCATTTTCCTACAAGCCCCATTTGTGTGGGCAGGGCCAGTCTGCCTTTGGGAGCCATGTCAGCGGACTAAACATATTACAGATGCAAATATGCTAGCGATCAGTAGCACTCTGGGATGCCCATGCACACATTTTGCACCCTAAATGCTGTACACAGCTTAACTATATGCCAATTTTGAAATAAGCCATGGCAATGTAATGCATAATGCTTTTATATTTGTACATGATACACCAATGGTACATTCctaattagaaaaaaagtttattttgtatttaaattattagaaatgCAATCTTGAATAAGAGCACTTGATTGAAGACATGCAGCAGTCATTGtaaattttgcttttttgctcATATTTCAAAATTACTGAACACTGTGTTATTTGATTTGTTAAAAACCTTACAATTTTGGTTATCAACTGTTGtagtttgtattttatgtaatgaacaaatacatatacaagaTATGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU38359 lncRNA upstream 44446 4132108 ~ 4132552 (+) True G25827
TU38357 lncRNA upstream 46576 4130144 ~ 4130422 (+) True G25825
TU38356 lncRNA upstream 47370 4129339 ~ 4129628 (+) True G25824
TU38355 lncRNA upstream 47748 4128923 ~ 4129250 (+) True G25823
XR_006250755.1 lncRNA upstream 169850 3988683 ~ 4007148 (+) True LOC122343346
XR_006250578.1 lncRNA downstream 44266 4224583 ~ 4227231 (+) True LOC122342475
TU38381 lncRNA downstream 72632 4252949 ~ 4253279 (+) True G25846
TU38457 lncRNA downstream 119350 4299667 ~ 4300306 (+) True G25892
TU38454 lncRNA downstream 142589 4322906 ~ 4323300 (+) True G25889
TU38501 lncRNA downstream 201858 4382175 ~ 4382506 (+) True G25927
XM_043237764.1 mRNA upstream 388 4175425 ~ 4176610 (+) True meig1
XM_043237745.1 mRNA upstream 6309 4164737 ~ 4170689 (+) True hspa14
XM_043237763.1 mRNA upstream 50191 4125348 ~ 4126807 (+) True lsm8
XM_043237757.1 mRNA upstream 55691 4115466 ~ 4121307 (+) True kitlgb
XM_043237737.1 mRNA upstream 63277 4102778 ~ 4113721 (+) True lmf2b
XM_043237894.1 mRNA downstream 234828 4415145 ~ 4429395 (+) True tspan12
XM_043237028.1 mRNA downstream 636731 4817048 ~ 4827652 (+) True adm2a
XM_043236167.1 mRNA downstream 652093 4832410 ~ 4840605 (+) False fbxo18
XM_043236168.1 mRNA downstream 653116 4833433 ~ 4840605 (+) True fbxo18
XM_043236549.1 mRNA downstream 661376 4841693 ~ 4847744 (+) True glt8d2
TU37969 other upstream 438404 3737502 ~ 3738594 (+) True G25551
TU37922 other upstream 674904 3481629 ~ 3502094 (+) True G25514
unassigned_transcript_301 other upstream 705863 3470366 ~ 3471135 (+) True LOC122343352
unassigned_transcript_300 other upstream 729424 3447058 ~ 3447574 (+) True LOC122343393
unassigned_transcript_299 other upstream 735498 3440912 ~ 3441500 (+) True LOC122342809
TU38369 other downstream 49312 4229629 ~ 4231092 (+) True G25837
TU38370 other downstream 52591 4232908 ~ 4235244 (+) True G25838
TU38543 other downstream 369846 4550163 ~ 4628899 (+) False G25958
TU38544 other downstream 369846 4550163 ~ 4628899 (+) True G25958
TU38659 other downstream 749154 4929471 ~ 4942735 (+) False LOC122343397

Expression Profile