RNA id: XM_043236194.1


Basic Information

Item Value
RNA id XM_043236194.1
length 8484
RNA type mRNA
GC content 0.42
exon number 12
gene id kcnh5a
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16748716 ~ 16821470 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAGAACTGCGAGCGCTCTGTGGTACAAAGGACCCATACCAGTCAGGCACGGCGCAGCGTTACCATGATCTTCTCCATCCCACCGATAGATTCCCATCCCGCCTGCATCACTTTAACGACCAGCTTCCAGCAAGTCCGCAAGCCTGACCGACGCTGCCCGGCCGCAGAATGCACGGGGGAAAAAGAGGACTGGTGGCACCACAGAacacttttttggaaaatattgtTCGTCGCTCAAGTGAGACAAGCTTCTTGTTGGGCAACGCTCAAATCGTGGAGTGGCCTATAGTTTACAGTAATGACGGATTCTGCAAGCTGTCTGGATACCACAGGGCAGAGGTCATGCAGAAGAGCAGCACCTGCAGTTTCATGTACGGCGAGCTGACAGACAAGAAGACAATAGACAAAGTCAGACAGACCTTTGATAACTATGAGTCCAATTGCTTTGAAGTGCTGCTCTATAAGAAGAACAGAACCCCTGTGTGGCTCTACATGCAGGTGGCCCCCATCAGGAATGAGAACGATAAGGTGGTCCTGTTCCTCTGCACTTTCAAAGACATCACTGTCTTCAAGCAGCCTATTGAAGATGAGACCACCAGAGGATGGACCAAGTTTGCCAGGCTGACCAGGGCTTTAACCAATAGCCGGAGCACACTTCAGCAGCTCACACCAATGAACAAGACTGAAGTCAGCCATAAGCATTCACGACTGGCAGAGGCTCTTCAGCTGGGCTCGGACATCCTCCCTCAATATAAGCAAGAGGCTCCTAAAACTCCACCTCACATTATATTGCACTACTGCACCTTTAAGACCACTTGGGACTGGgtcatcctcatcctcacctTCTACACGGCCATCATGGTGCCCTACAATGTGTCTTTTAAGACCAAACAGAACAACCTGGTGTGGTTGGTACTGGACAGCGTGGTGGATGTCATCTTCCTTGTGGATATTGTGTTGAACTTTCATACAACTTTTGTGGGACCTGGAGGAGAGGTCATATCTGACCCAAAGCTCATACGCATGAACTACTTGAAGACCTGGTTTGTCATAGACCTGCTGTCTTGCCTGCCCTATGACATCATTAATGCCTTCGAAAATGTGGATGAGGATCCCATTGCAGACTCTTCTGCAGTGGGCCACTTGCCAGCTGCGGCCCACTCTCAACGCAACGGCACACGTGCGGAGGACTCAGTGTTGCCTGGTCTCAGCAGCCTCTTCAGCTCATTGAAAGTGGTGCGTTTACTCCGTCTGGGTCGAGTGGCGCGCAAACTGGACCACTATCTGGAATACGGCGCTGCTGTGTTAGTTTTACTGGTGTGTGTCTTTGGCTTGGTGGCACATTGGCTGGCTTGCATCTGGTACAGCATTGGTGATTACGAGATCATCGATGAGGGCACCAACAACCTCAAGAGGGAGAGCTGGCTTTATCAGTTAGCTATCAGCATTGGGACACCATACCGCTACAACGCCAGTGGCTCTGGCCAGTGGGAAGGCGGTCCCAGTAAACACACACTCTACATTTCATCTCTCTATTTCACCATGACAAGCCTCACCACCATTGGCTTTGGGAACATTGCACCTACTACAGACGGGGAGAAGATCTTCTCCGTGGCCATGATGATGGTGGGCTCTCTTCTGTACGCCACCATCTTTGGAAACGTGACCACCATCTTTCAGCAGATGTATACGAACACCAATCGCTACCATGAGATGTTGAACAATGTGAGAGACTTCCTGAAGCTCTATCAGGTGCCTAAAGGACTGAGCGAGAGAGTGATGGACTACATTGTGTCCACATGGGCCATGACCAAAGGCATAGACACAGAGAAGGTTCTGTCCATCTGTCCTAAGGACATGCGTGCAGACATCTGTGTGCACCTCAACCGCCAGGTGTTCAACGAGCACCCTGCCTTCCGGCTGGCCAGTGACGGCTGTCTGCGCTCTTTGGCGGTGGAGTTCCAAACCACACACTGCGCTCCGGGAGATCTCATCTTCCACGCAGGGGAGAGCGTGGACACTCTTTGCTTTGTGGTTTCTGGATCGCTGGAGGTCATTCAGGATGATGAGGTTATTGCCATTTTAGGTAAGGGTGACGTGTTTGGTGATGTGTTCTGGAAGGAATCAACACTGGCTCATGCCTGTGCTAACGTGAGGGCTTTGACATACTGCGACCTGCATGTCATCCGGAGGGATGCGTTACTCAAAGTGCTGGAGTTCTACACGGCCTTTGCCAACTCCTTCTCCCGAAACCTCATCCTCACCTGCAACCTCCGCAAGCGGATTGTTTTCCGTAAGATTGTTGATGTCAagaaggaggaagaggagaggaggcACCAGAAAAATGAGGTGACGTTGTCAATCCCTGTAGACCATCCCGTCCGAAAGCTCTTCCAAAAGTTCAAGCAACAGAAAGAGATGCGCACACAAGGTTCATCCCAGCATGACTTGGAGAGGAACCAGTTTCAGGTGGAACACCACCTTCATCCACTCTCCCACCAGATTCATCAGCAGCAATATCAGCCCCAGTACCAGGGCCACCACCCTCTTCAACATCAACACGTGGCTCCCATGCAAAACGGGGCCCCTGGATCAGGAAATGGGAACAGTGGTTCTAGTGTTGTCACCGTTTCACAGATAACCCCAATTCAGAGCGCCCTAGCCTATGTTCAGACTGAGGAATCGAACAGAAGTGAAGGCCATGAGGCTATGGAGCTCAAACCCAGCTTTGGTGTAGAGGACTCACATTGTCTGAAGGTAACAAGTCCAGTGAGAccaagaggaggaagaggacgtGGCTGGATGCGTTTTCATAACATTGCATCAGGATCATCTCCTATGCTTCCGCTGGAACTAGAGAAGCAGCCGCAGCAGAAGGAAGAGGAATGGGGGGATGTAGCCCAGCCGCTAAATGTGATATCCGAAGATCGAAAAAGCCAGGAAGCAGAGGGTGGGCGGTCTAGCGAAAGGGGTCCCGGTGGAAACAGTAACAGTAGTGATGAGACTGATGAGAATAGTGCTCTACACAAGACTGATTCTTGCGACAGCGGAATCACAAAAAGTGACTTGCGTATAGACCGGGTAGGTGATTCACGGAGCCCATACGAGAGATGCTCAATGGAAAGGAGCCCATACGAACAGCCCAGTCCTGGAGTGGGCGACATGACCCTTCAGGGTATTCACTTTCCACCTGTCCCTGAACAGACTGTGCTTCAAAACACTCTGTACGAGGCAAAGCTGGAGCTAAAAGGTGACATCCAGACATTAAATAGCCGGCTAGCAGCTCTGGAGGACCAGGTGGGGGAGATTCTGAGACTTCTTTCTGAGAAGAGGAAACCTTCCCCACCTCCTCAGACCTCCTCGCCAAAAACCCCACTTCAGTGCCAGGACATCTTTGCCGTTTCTCAGCCTGTCACTCCAGAAACGGAGGGGGACAATGGACCTCTTTGAATTaggataaatatatttagatattgaTATGCTGTTTTTATCACTTCCCTTCCTCACACTCAGGAAGGAAAGGTGAATATTGATGATTAGAGGAAGGATCCTTGCTGTTGTAAATATATGCTTGCATGTCCAGCTGGATTCTGGCCTGCCAATGAAATCTTCTCTACAGATAGTAGTTGCTTGTACACGTACAGAGTCGGCTGCATGCGGAGATGATTTTATTCTGACCTTGCACATGGGATCTTCTAACCAGGTGATATTTCAGGGCATTTTCTCTTTGAATGACAGCTTGATGCCCTAGACGTGGAATCTTGGGTTGCTGGAAGACAAAATCAGGCTTGGTTTAATGCCGCTATTGGTCATTCTTCATAGTGGAATGGCTATTAATAGCTATAGTCATTTAAATTAGACAGTTAGTCAAAAATTGACTGATGTCGTTCCAAATATGTatgacttgctttcttctgtagagcctaaaagaagatattttgaagaatgagtTACCTGTTTTTGTTGGTAATACAGTGAGATCCAACATACCGTTAGACCCTATAAAATTTCATTGTATGGactaaaaacagacatttttcaaGATTTTGTGTTTGACTCAaagaaaagtcatacaggtttgaaacaacatgcgGCTGAGTTATTGATGACAGGTCTTTGATTTTTAGGTGAACAATCCCTTTAGCACAGTTTTCTCAAATACTATTTCCCCCAGTATGCAGTTCTCCTTTATAAGCATAATGATTGGAAGTTTGCAGGATTGTTTGCCTAGGTGATTTCTTGGATGTGTTTAAGGCGATAATCCAAAAAACTAAACTCATTTTTGatattcaaaacacatttcattacCAACACTGTTCAAATTCCATTATCATTATCGccttttctgtatttattttgtggaaaGTTATGATAGATAAGAGAGGAATGAGTTAGCCCAATTTTTGAGGGgctgttttacatgttttagagAGATATATCTGCATGCTGGATGGATTTAGCTCTGGCATGGTAGGACTAGGGACTAATTGTTTTTCCCTTATCAATTATGCAAACATACAAAGTGCAAGTCTCAAAGGGGGTTGGGGGGTGGGGGGCTGCATTTTGGGAAAGCATGAACACATTCAGGTCATTTGGAAATTATACAAGCATGCATTGAATTCTTTGCATGGCATCAACATTGTGTGTTACATATGAAAGGTCATGGATTTCTAGTTATGTTTCCCAAGAGATATCAATGTATGCTACCCACATACAATTTCATTCCAGATGCATATTTCAGAACCTTTAGATTTTAATCCAGTACCCACTGGATTACAGCCACACTAAACTGCTTACTAAGGCAGTGATATTGAATGAACCTTTCAGTTGGTCATTTGAAAGTGCTGTGGGGAactaaatattgcattattatagCCACAGGCAGTGACTCACTAGGTATCAGCATACTCATGGGTGCTTTAGACGGTTTATAGTGTAATGACTAATGCCCCTTCACCTCTTATTTCCCATCAGTTCTATTGTATGTTATTAGTCCATTCTGGTGATGTTCATACCAAACACAAGGGATGTTGAATTGTGAATAGGGTTCGGGTGAGAGACTATTAAGATTAATATAAGAACAACAGGAGTGTTGGCTGTTACTGCATACAGATccttttacataaaaatgttctaTCATGAAGCAATCCACAAATAAGCAACAGTACATAAAAGCAATAGCTTTTAACATATCCCTTCCATTATTCTCCAGTTTGGTTTCCTCTTTGATGAACACATGCTCATAACTGTAAGTGCTCAGATAATAATATTAGTTCACTACTAATCGtttgttttaatcattattGCAGATATTATGTTGTTAATTGGGACCAAAGACTAATCGCATTAAATCAGTGTCCTTCTCAAATTCCCAGCCCCATTGTTACCTGTCACCAGTGGATGGTGACAAAACCTTATTGGGTTTTCTGTTTTGCTACttgagcaaaataaacataagaTAGATGAGAGTTTcactaaataaattgtttaaatgaaatgagaacaaatacatttgaaagaaTTGTCTTTGgctaaactatccctttaaagtggacttcaactttttttaaatttaaaaatatatataataaatagcagtaataatttttattctttttcgtTCACTGGTGTCATGCCTTGAGATTTCAGTGTCCTGTGCTCCTTCATTGTGTTTGAGTTATTTTTTCCTGTCATTCAGCCCAGCGGAGAGGAGCACAGACAGTGAAAGGGATTATTCTTTGAGTCTCCCATGAAATTGAAGAGATGGATATAATAGATGCTAAAAGCTGTAATAGTGTGGCAGACGACGTGTGTCCCTGTAATGGAATGGAGCTGACTCGCTGCGTGGACCCCAGGGTGCCTGTTTTGAGGATTACACACAGATTTGGGAAAGCTATGAGGGTATTGGGCTCCACTGGGTATTGAAACTTTTCGGAGTGGGAAGGGTTTGAGATGACGTGCCCGATCCTGAGCACCACAAGCCCAGTGAGGCGTTGGGAGTCTGGCATCTGACTGCATGCTGCATTTTTGAACTGtataaaacttaatgccaatgAGAATGATATTTGCCTGCCAAAGCAGTGTTTAGCTGCGACTTttcgtgcacacacacaaaacggGCAGAGGCCTGGGCACTAAATCACTAAAAACTCATCACAAAACACAGTGTTGAAGACATTACATGTGTATACAGCAAATGCCTATTAGCATATGCTGGTCATTGCACCACAGTCAGCAAACATAGCAACTGacattaaattgacatttattatttcttcagTTTTTATACCGTAGACAAgtagtttatttaataacacataAGAATAGTTTTTCTCATAGAAAATATTAGCTGTTGTGCCTTTTCAAAGGATTCATACtgtttaaaattttcttcacaaaggaaatattttggcttttttgaCACTAACCATTTTAAGTAAGTATATTAAGAAGTATATTAATTTTGCCCTAGTATGTATTCCTactcaagctctgtcaggttgCATAAGTGTCTTGAGAAAAAGGACCTTTATAAAGTGCACCCATAAATTCTGAGTTGGACAAAAAAATCTGGatttgttaaagggatagttcacccaaaacttcTTGTTTCGGTCAGTTCTGtcagaatgttggtaaccaactGTGTCAGATatgtttctttgtattttggttctttctttctcattgaTTTAGTTTCTCAGTCagtttgattcattcattctgtATACATTACTGTATTAATTAGCTCATTagtttcttaatttttattattatttatttatttattttctcttttttttggtcagtttCCTTTTTCTGGTGTAGTCCATGTTACGGCCTATTTTGGAACATTATCttcggtcacactttattttaaggttcagTTCTCACCATTAGCAAACTTTTGCTATACTACACTTCTATTTTGCTGCTTGTTTAGGTATTAGGTAGgatattaaatatgttcattcagaatgtgtgctttaaaagtactaataaacagccaatatattGACAGTACTGTAACAATGCTAATAACatctagttaatagtgagaattggttcttatactaaagtgttaccttatttTCTTCGCCAATCTTGTCTCTGTGTGACACCGGTCAACTATTTGGTtactaccattttttttaaatatctgcttttgtgttcaTCAGCAGAAAGAAACTCAGGCATGTTTGAAACAAGtataaatgacagaatgttcatttttgggaaCTATCCCTGTAATAAGCGTTGTCTTTTTGCTTAACATTGTCATCTTGCTTGAAAACAGATTCTTCGGGGCTTCTATGTTttcctgcatttatttttacgcTTTGCCCTGCTAGGGAAAGAAGCATCCCCACAACAAGATAGTGTGTTTCAGATCATGTGACATTGGCTTACAACAAGCATGGCGTTTAATCTACTGTCCAAGCTCAATTTTCATCTCATCAGACAAACAAATCTTCTCCCAGCTGGCTTTAATGTTTCCCACATGTCTTCTAGTAAAGTGCCGACGAGATGTCATATGCCATTTTCTAACAGAGGCTTCTCTCTGTCACTCTCCCATAAAGCTGTGTCTGCAAAGCATTTCCATTTCTTAATTACTGGTTTAACTCCAAGAGATATTCAGTGGCGCATCCATCTCCTGGCTTGTGCTTTTCTATTACTCTTTTCAGAGTTGCTTGGAGTGTTAGTTTTTCCTcatggtttatgttctgccgcAGTTCTGACTCACCAAAACTTGGACCTCGCAGATAGAAGTATTTATAGTCATCGAAGTATGCTCACAAGTCCATTTAACTATTCATTTAACGTTAAGTATTTATGACTACAAACCATTTGGCTGCACCAATAGTGGTATTGGTGAGTCACATGCAAGGATGAAAACTGATTAtattcataatcacttcttagAGTGTTTTCTCTTTTGAAATTAAAGTCTCTTTAATGATCAGTGTCAAAAAGCCAAGTAAAGTCCTATGTGATTCAGTGCTGTTCAACAATGGAACATGAAAAAAGATAGTATATAGGAACTGTAAAGGTGAAGATTAGGCATTCACCTCAAAATTGTCACAAGAACCTTGTTTATGAATGAAAAGGTGGTTGaggtttaaattcatttttaactgGACAGATATTGGTGTCAGATAAGCCGTCAATTCAAGCTGATCTGCGgttcattctttctttcagaCCTGCATGTTTCAGACGTCAGCAGAATTTCATTGCTCTCATCTGCTCTCATAGCTAAAGTGCTGCCCAGGCTCCTCTTAACCCTTTTGGAAGCAGTGACCACTGAGTTTATTAAGCTCCTTTTCCACTGTAAATGAGACTGCCTTTTTATcagtgtaaaaaatattataatatttctgaGGGAGGTGCGgggaaaagtgtttatttttaccaCACTGGCATGAATATTAAGAATTTGTTATATACAGTGTAATACACtgatgttataaaataaaaatttaa

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0042391 regulation of membrane potential biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0000160 phosphorelay signal transduction system biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0000155 phosphorelay sensor kinase activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04908 KCNH5, KV10.2; potassium voltage-gated channel Eag-related subfamily H member 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU43019 lncRNA downstream 47045 16701068 ~ 16701671 (-) True G29021
TU43009 lncRNA downstream 138717 16609636 ~ 16609999 (-) True G29012
XR_006250612.1 lncRNA downstream 197712 16550333 ~ 16551004 (-) True LOC122342602
XR_006250611.1 lncRNA downstream 203095 16544954 ~ 16545621 (-) True LOC122342601
TU42954 lncRNA downstream 284037 16464445 ~ 16464679 (-) True G28970
XR_006250656.1 lncRNA upstream 86739 16908209 ~ 16924965 (-) False LOC122342882
XR_006250657.1 lncRNA upstream 93852 16915322 ~ 16924965 (-) True LOC122342882
TU43160 lncRNA upstream 133985 16955455 ~ 17026339 (-) False G29127
TU43163 lncRNA upstream 133985 16955455 ~ 17026339 (-) True G29127
TU43183 lncRNA upstream 217357 17038827 ~ 17040834 (-) True G29143
XM_043237521.1 mRNA downstream 23922 16710524 ~ 16724794 (-) False LOC122343211
XM_043237520.1 mRNA downstream 24346 16710524 ~ 16724370 (-) True LOC122343211
XM_043236544.1 mRNA downstream 155622 16573127 ~ 16593094 (-) True LOC122342599
XM_043236534.1 mRNA downstream 205814 16537980 ~ 16542902 (-) True LOC122342596
XM_043237033.1 mRNA downstream 249877 16484567 ~ 16498839 (-) True LOC122342885
XM_043237664.1 mRNA upstream 19235 16840705 ~ 16851156 (-) True ppp2r5ea
XM_043237579.1 mRNA upstream 31529 16852999 ~ 16864423 (-) True sgpp1a
XM_043237581.1 mRNA upstream 43035 16864505 ~ 16867985 (-) False snapc1a
XM_043237580.1 mRNA upstream 43035 16864505 ~ 16867985 (-) True snapc1a
XM_043237577.1 mRNA upstream 46991 16868461 ~ 16881395 (-) True hif1ab
TU43020 other downstream 39756 16707774 ~ 16708960 (-) True G29022
XR_006250870.1 other downstream 728154 16020444 ~ 16020562 (-) True LOC122343883
XR_006250906.1 other downstream 728557 16020041 ~ 16020159 (-) True LOC122343926
XR_006250859.1 other downstream 730541 16018057 ~ 16018175 (-) True LOC122343872
XR_006250836.1 other downstream 730940 16017658 ~ 16017776 (-) True LOC122343847
XR_006250655.1 other upstream 65504 16886974 ~ 16900295 (-) True prkchb
TU43174 other upstream 185457 17006927 ~ 17017823 (-) True G29135
TU43209 other upstream 297158 17118628 ~ 17122129 (-) True xrcc3
TU43541 other upstream 815689 17637159 ~ 17638709 (-) False srd5a3
TU43577 other upstream 913880 17735350 ~ 17736274 (-) True G29417

Expression Profile