RNA id: XM_043236240.1


Basic Information

Item Value
RNA id XM_043236240.1
length 973
RNA type mRNA
GC content 0.44
exon number 8
gene id yeats4
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 87004 ~ 89152 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TAATTTGAAGTTTGACTCGCAAACGAAGACGGAGTGCTATGAGAGCTACGTGCTCATGCTTTCTTCACGAAGAAACATAGGATGGCTGAATTTGGTCCAGATTCGGGGGGTCGAGTGAAGGGAGTGACTATCGTGAAACCCATAGTGTTTGGAAACGTCGCACGCTATTttggaaagaaaagagaagacgATGGTCACACTCATCAGTGGACAGTTTATGTGAAGCCTTACAGAAATGAGGATATGTCTGCTTatgtcaaaaaaatacaattcaaacTGCATGAAAGTTACGGGAACCCTTTAAGAGTGGTTACGAAGCCTCCATATGAGATTACTGAGACTGGATGGGGAGAGTTTGAGATCATCATAAAGATCTTTTTCATCGATCCAAATGAGAGACCGGTCACACTGTATCACCTGCTGAAGCTCTTCCAGTCAGACTCCAGTGCCATGCCGAAGAAGACCGTTGTGTCCGAGTTCTACGATGAGATGATATTTCAAGACCCTACAGCCATGATGCAACAGCTCCTGAACACCACCAGACAGCTGACTTTGGGGGCCTACAAACACGAGACAGAGTTTGCAGAGCTGGAGGTACGAACACGAGAAAAAGTGGAAGCGGCGAAGAAGAAGACAAGCCTGGAGATTGCAGAGCTGAAGGAGCGACTGAAAGCCTCCAGAGAAAACATCAACTTCCTGAAAGGAGAGATACGCAGACTGGAAGAGGAGGACCAGATGAAGGACCACTGAGGACTTCAGCATCATCACACAGCTGTGAACACTTACTGGGACTGATCACTTCACATTTCAGTAGAGAACAACTATGTGTTGTGCAGTTTTATGTCCAGATCAgcaaaatgtgtgaaaatatgAGACTACCTTTTGAGCTTCTGTAGTTATCACAGAcatgttttgtataaataaacctttttttgttgttgttgtttttttacaaatacaaatattgtctGAT

Function

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36576 lncRNA upstream 416 85235 ~ 86588 (+) True G24554
TU36571 lncRNA upstream 4481 75388 ~ 82523 (+) True G24553
TU36573 lncRNA upstream 4481 75388 ~ 82523 (+) False G24553
TU36574 lncRNA upstream 4481 75388 ~ 82523 (+) False G24553
TU36575 lncRNA upstream 4481 75388 ~ 82523 (+) False G24553
TU36595 lncRNA downstream 27047 116199 ~ 116891 (+) True G24567
TU36599 lncRNA downstream 102240 191392 ~ 194183 (+) True cmah
TU36619 lncRNA downstream 126823 215975 ~ 281984 (+) False G24586
TU36621 lncRNA downstream 153414 242566 ~ 282841 (+) True G24587
TU36627 lncRNA downstream 161020 250172 ~ 252374 (+) True G24593
XM_043237891.1 mRNA upstream 69100 13818 ~ 17904 (+) True LOC122343428
XM_043237890.1 mRNA upstream 73886 9542 ~ 13118 (+) True LOC122343427
XM_043237828.1 mRNA downstream 1056 90208 ~ 107305 (+) True frs2a
XM_043236793.1 mRNA downstream 95564 184716 ~ 193483 (+) False cmah
XM_043237774.1 mRNA downstream 105940 195092 ~ 199536 (+) True glipr1a
XM_043237775.1 mRNA downstream 116353 205505 ~ 213159 (+) True LOC122343357
XM_043236781.1 mRNA downstream 254440 343592 ~ 360922 (+) True zdhhc17
TU36577 other upstream 2042 83688 ~ 84962 (+) True G24555
TU36656 other downstream 204083 293235 ~ 295069 (+) True G24609
TU36680 other downstream 284375 373527 ~ 373824 (+) False G24632
TU36683 other downstream 284375 373527 ~ 374082 (+) True G24632
TU36860 other downstream 564940 654092 ~ 665530 (+) True G24771
TU37077 other downstream 1199160 1288312 ~ 1291224 (+) True ndufa5

Expression Profile