Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043236346.1 |
| length | 1103 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 9 |
| gene id | atp5f1c |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 13146654 ~ 13150706 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | cellular_component |
| GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | molecular_function |
| GO:0046961 | proton-transporting ATPase activity, rotational mechanism | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006250594.1 | lncRNA | downstream | 75134 | 12988707 ~ 13071520 (-) | True | LOC122342546 |
| XR_006250593.1 | lncRNA | downstream | 75134 | 13022123 ~ 13071520 (-) | False | LOC122342546 |
| TU41980 | lncRNA | downstream | 75501 | 12988876 ~ 13071153 (-) | False | LOC122342546 |
| TU41701 | lncRNA | downstream | 877914 | 12265665 ~ 12268740 (-) | True | G28130 |
| XR_006250651.1 | lncRNA | downstream | 908517 | 12236645 ~ 12238137 (-) | True | LOC122342788 |
| TU42001 | lncRNA | upstream | 26255 | 13176961 ~ 13177984 (-) | False | tmem110l |
| TU42027 | lncRNA | upstream | 76994 | 13227700 ~ 13227947 (-) | True | G28349 |
| TU42028 | lncRNA | upstream | 78388 | 13229094 ~ 13229319 (-) | True | G28350 |
| TU42033 | lncRNA | upstream | 91800 | 13242506 ~ 13245388 (-) | True | G28353 |
| TU42039 | lncRNA | upstream | 99945 | 13250651 ~ 13252034 (-) | True | G28359 |
| XM_043237675.1 | mRNA | downstream | 1746 | 13102315 ~ 13144908 (-) | True | taf3 |
| XM_043236658.1 | mRNA | downstream | 55819 | 13075216 ~ 13090835 (-) | False | gata3 |
| XM_043236663.1 | mRNA | downstream | 61090 | 13076300 ~ 13085564 (-) | False | gata3 |
| XM_043236661.1 | mRNA | downstream | 61094 | 13075216 ~ 13085560 (-) | False | gata3 |
| XM_043236662.1 | mRNA | downstream | 61095 | 13075216 ~ 13085559 (-) | False | gata3 |
| XM_043236342.1 | mRNA | upstream | 1715 | 13152421 ~ 13164123 (-) | False | itih2 |
| XM_043236341.1 | mRNA | upstream | 3440 | 13154146 ~ 13164123 (-) | True | itih2 |
| XM_043236651.1 | mRNA | upstream | 26314 | 13177020 ~ 13186890 (-) | True | tmem110l |
| XM_043237035.1 | mRNA | upstream | 117369 | 13268075 ~ 13275467 (-) | False | pfkfb3 |
| XM_043237034.1 | mRNA | upstream | 117369 | 13268075 ~ 13275381 (-) | False | pfkfb3 |
| TU41785 | other | downstream | 657498 | 12481920 ~ 12489156 (-) | False | cpm |
| TU41786 | other | downstream | 657498 | 12482102 ~ 12489156 (-) | False | cpm |
| TU41650 | other | downstream | 1130887 | 12014631 ~ 12015767 (-) | True | G28093 |
| XR_006250735.1 | other | downstream | 1600842 | 11426497 ~ 11545812 (-) | False | ppfia2 |
| TU41528 | other | downstream | 1722571 | 11422069 ~ 11424083 (-) | False | ppfia2 |
| XR_006250598.1 | other | upstream | 166226 | 13316932 ~ 13361938 (-) | False | tmcc3 |
| XR_006250597.1 | other | upstream | 166226 | 13316932 ~ 13361938 (-) | False | tmcc3 |
| XR_006250596.1 | other | upstream | 173819 | 13324525 ~ 13361938 (-) | False | tmcc3 |
| TU42098 | other | upstream | 260918 | 13411624 ~ 13422539 (-) | False | G28397 |
| XR_006250767.1 | other | upstream | 542239 | 13692945 ~ 13698715 (-) | False | LOC122343399 |
