RNA id: XM_043236426.1


Basic Information

Item Value
RNA id XM_043236426.1
length 2971
RNA type mRNA
GC content 0.40
exon number 15
gene id slc37a3
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15656075 ~ 15664306 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

taaaaaagaCTATTATCgaattaattaatagttaacGGCAGACAGTAACTTGCTCTGGCCCCCTTAATAGACTTGTGGCCCAAACGAAAATCTGCCCGCGATGATAGCTGTTACTTTTGTCCtggtataattttatttttagttattgttttttttttttttttttgtggtattttTATGGTGTTTGCAAGTGCTGAATGTTCGGATAttgttactatttttttaataaatctaaactTTAACAATTATTGCGGTTATTGcaattgttatattataaagcTTGCATTACATTTCTTACAAACTGGAAGAGACCACTAAAAAGGAGGAATAGCCACATCAACGTCTCTTCTGCGGTatctttacaaaatatttagaacATCTTTGCTTTTATGTTGCGCTTAAATCCGTAataaagtgacttttattttgaaactcaACATCCGGGTGACGTCTGTGTTTAGATTTTAACGCGTGTTTACGTTGCATTGAGCGTCGGAAAAGAATGGCGATATTTTCCAGTCAGAAATGAAATCGCAGCTAATTATTTAGAGGACCCATATAATGTGGCCCCCCTATACCTATCATCACCTGCTAGCCTTCCTCCTCACGTTCCTCAGCTATGTCCTGCTTCACTCGTCACGTAAGACTTTCAGTAATGTGAAAGTGAGCATCTCAGCACAGTGGACACCATCAGCATTCCAACAGAATAGCACCACTTCATCTTTGTCTCCAGGCGAGacatgGGAAGAAAACAAACTGTTTGCTGATGTGGGAGAGGCCACACTGTTCCTGGGTGCTCTGGATTCAatctttctcttctcttatGCTGTGGGTTTGTATATCAGTGGTGTAATTGGTGATCGGTTCAACCTTCGCTATGTTCTCTCCTTTGGTTTATGTGGATCCGCTATCACGGAATTTGTCTTTGGCACTTTGACAGAGTGGCTTCACTTTTATAACGTGTACTTTTACTGCATCTTGTGGGTAATAAATGGACTGCTCCAGTCTACGGTATGGCCTTGTGTTGTGGCCATCATGGGCAACTGGTTTGGAAAATCTGGACGAGGCTTTATTTTTGGACTTTGGAGCGCATGTGCATCTGTGGGGAATATTTTGGGTGCGTTTCTTGCCTCCAGTGTCCTGAAGTACGGCTATGAGtatGCTTTTCTCGTGACATCAGTGGTGCAGTTTGCAGGTGGTGTAGTCGTGTTTTTTGGCCTGCTTACATCCCCAAAGGAAATTGgactaAGTGATTACTCTGAGACAGGTCTAAGATCAGTGTCAAGAGACTCAGATAGTCAGCGTCCTCTGATaagtgatgatgaagaggaTTTATGTGATGAATACTCCATACAGCAGCAAGATGAGGAGCCTGAACCGCAACCCAAAGCCATTGGCTTTCTCCAGGCCTTCTGCCTGCCAGGAGTCATTCCTTATTCTCTGGCTTATGCATGTCTGAAGCTGGTCAACTACTCTTTCTTCTTCTGGCTGCCATTTTATCTCAGCAACAACTTTGGCTGGAAGGAGGTTCAGGCCGACCGGCTGTCTGTGTGGTATGATGTGGGAGGCATTGTTGGAGGAACAGTACAAGGCTTGATCTCAGATCTTTTGGGAAAGCGAGCTCCTGTGTTAGCGATCAGTCTGCTGCTGGCCATGGGAGCATTAGTGGGATACAGCCACTCTCCAAATAACCAGCTGGTAAATGGAGCTCTTCTAGCAACAACAGgGTTCCTTATTGGAGGACCATCAAACATGATCAGTTCAGCAATCTCTGCGGACTTGGGTCGACAGGATGCACTACAGAATTGTCAGGAGGCTTTGGCCACCGTCACAGGAATAGTGGACGGCACAGGAAGCATTGGAGCGGCAGGGGGACAGTATCTGGTATCACTCATTGAGAGCAAATTAGGATGGATGTGCGTCTTCTACTTCTTCATAATTATGACAGGGTGCAGTATACTCTTCATCATTCCGCTCATTTACCATGAAATCCGCTCCTTGTGCCGGGATAGTCAAGCTCGAACACATCAGCTCTGAGATGGAATTTCTTTGCCTGAAATCGAAAAGAAAAACAGGGCATTTTGAAAGTACACACATGCTATTTGTGAATTCACCGctttaaaatttttgttttcagcaaCAGAAACCTCACATTTAGTCCAtatcaagacattttttttatttttatttttattttttttattaacacgAAAACCAGATTACACAATGATCTGACCCTGGTCTTATTGTTTGGAAGACTCCTGGCAATGTGAAGACTTGTACCTCATTACTTAGTAACCACTGTCTGAACAATAGGGTCACCAATCGGCAGTGTGGCCATTTCTAATGGTTAGATATGGAAACCAAATCAAATTTGTTTTAGATTTGTCACAGATCTCTCCCTCCAATCCATTGATGAGTGCCATCCTGGAatgttgcttaatttttttttttatttctgtgtattgcTGCcagcacattttttaaataacagttttataattattgttagaGGGCAGGACCCTCTTGAACTTAATTAATGGAGTAATAGTGTATTGAATGATTACTTGAACAGAGGACATATATTCATAGCATCATGTAGGTTTTTGGGTATTTTCGTGTTAGATGTgcaccttttttctttttttttttaaattgacgCTAAGTGTATGATGGTATATTTAAACACTGCAATTCAgcaaatgtatgttttgtatttaaaccaTCGGAACTTGTACAGTTATTGCTTGCTTGTTGGAAACGTGAGGTATATTGTtcctacatatatatatatatttgtaaaaatacaggCGGATAACATGTCTTTATTGAAAAGCTTATAGTCAATCACCCAACCATCCACTTATTCCCAGCTTGTACCATATGTTCATAATAATTGAAGAAAAATGAACTACTTTAATTTGCAATCAAAATTGCTTTTCATAACATTAAACAGGAACAGCAAAAAGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU42824 lncRNA downstream 894 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 210846 15443764 ~ 15445229 (-) True LOC122342747
TU42788 lncRNA downstream 237837 15416856 ~ 15418238 (-) True G28850
TU42674 lncRNA downstream 442624 15209684 ~ 15213451 (-) True G28789
XR_006250554.1 lncRNA downstream 632212 15017785 ~ 15023863 (-) True LOC122342397
TU42849 lncRNA upstream 69057 15733363 ~ 15733883 (-) True G28887
TU42857 lncRNA upstream 179099 15843405 ~ 15843739 (-) True G28895
TU42859 lncRNA upstream 263837 15928143 ~ 15928900 (-) True G28897
TU42891 lncRNA upstream 714394 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 747554 16411860 ~ 16419956 (-) True G28933
XM_043236027.1 mRNA downstream 8232 15644189 ~ 15647843 (-) True sapcd1
XM_043236026.1 mRNA downstream 8346 15644189 ~ 15647729 (-) False sapcd1
XM_043237519.1 mRNA downstream 23623 15613118 ~ 15632452 (-) True large1
XM_043236562.1 mRNA downstream 44500 15601440 ~ 15611575 (-) True kiaa0930
XM_043236319.1 mRNA downstream 67167 15555251 ~ 15588908 (-) True LOC122342488
XM_043236424.1 mRNA upstream 137 15664443 ~ 15673234 (-) True zgc:171422
XM_043236016.1 mRNA upstream 10513 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA upstream 10513 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA upstream 10513 15674819 ~ 15680024 (-) True tmem19
XM_043236543.1 mRNA upstream 813485 16477791 ~ 16483176 (-) True LOC122342598
XR_006250613.1 other downstream 44500 15601440 ~ 15611575 (-) False kiaa0930
TU42583 other downstream 628457 15024587 ~ 15027618 (-) True LOC122342864
TU42581 other downstream 628457 15026110 ~ 15027618 (-) False LOC122342864
TU42549 other downstream 845938 14808597 ~ 14810137 (-) False LOC122342642
TU42539 other downstream 958889 14695860 ~ 14697186 (-) False LOC122342862
XR_006250809.1 other upstream 182663 15846969 ~ 15847087 (-) True LOC122343609
XR_006250818.1 other upstream 193078 15857384 ~ 15857502 (-) True LOC122343689
XR_006250819.1 other upstream 215815 15880121 ~ 15880239 (-) True LOC122343700
XR_006250820.1 other upstream 216214 15880520 ~ 15880638 (-) True LOC122343711
XR_006250908.1 other upstream 218195 15882501 ~ 15882619 (-) True LOC122343928

Expression Profile