RNA id: XM_043236726.1


Basic Information

Item Value
RNA id XM_043236726.1
length 2599
RNA type mRNA
GC content 0.54
exon number 11
gene id pkma
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28368455 ~ 28382557 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGTGTTCGGGGGCTAATGTGGGCCTGGAGTCTCATTAGAGTCCTGCTCGTGCAGGACGGCAAGCGTGACTTGCGTGTTTTATCCTCTTCGAAGGGAAGAGGATTTAGCGCTCTGTGTCCTCGGCGGCACGATGCGTGCTGCTTCATTCTGGCCGGCGCCGCGATCGGGGAGGGAAGGTCACACAATCTGGCGCTCCTCCGCAGGGCTCTGAATGACGCGCGGTGCATCGTTTCTCAGAGCCGAAGGGCCTACAGgATATTACCCATCTCCTCCACGATGCCCCATACTAAGCCTCAGGATATGGGCTCTGCCTTCATCCAGACTCAGCAGCTCAATGCTGCCATGGCAGACACCTTCTTGGAGCACATGTGTCTGCTGGATATCGACTCTGAGCCCACCATCGCCCGCAACACTGGAATCATCTGCACCATCGGGCCGGCCTCTCGCTCTGTGGATACGCTGAAGGAGATGATCAAGTCTGGAATGAACATTGCTCGTCTCAACTTCTCTCACGGCTCGCATGAGTATCACGgtgaaactattaaaaatgtacgtGAAGCGTGTGCCAGCTTCGAGCCGGGCAGCATCCAGTACAGGCCAGTGGGCATCGCTCTAGACACCAAGGGACCAGAAATCCGAACCGGACTCATTAAAGGGAGCGGCACGGCTGAGGTCGAGCTGAAGAAGGGGAATAAGATCAAAGTGACCTTAGACGATTCTTTCATGGAGAACTGTGACGAGGATACGCTCTGGCTGGACTACAAGAACATCACCAAAGTGGTTGAAGTGGGCAGCAAGGTCTATATTGATGATGGACTCATTTCTCTCCAGGTCCAGGAGATCGGTTCTGACTATCTGCTGTGTGAAATTGAGAACGGAGGAACTCTGGGTAGTAAGAAGGGTGTCAATCTGCCGGGTGCCGCGGTCGACCTGCCCGCCGTCTCCGCGAAAGACGTCAAGGACCTGCAGTTCGGCGTGCAGATGGGAGTCGACATGATCTTTGCCTCTTTCATCCGCAAGGCAGCTGATGTGCACGAGGTGCGCAAAGTGCTGGGAGAGAAGGGCAAGAACATCAAGATCATCAGCAAGCTGGAGAACCACGAGGGCGTGCGCAGGTTTGATGAGATCATGGAGGCCAGTGATGGCATCATGGTCGCTCGAGGAGACCTTGGTATTGAAATCCCCACAGAAAAGGTCTTTCTGGCCCAGAAGATGATGATTGGTCGCTGCAACAAAGCAGGAAAGCCAATCATCTGTGCCACTCAGATGTTGGAGAGCATGATCAAGAAGCCTCGCCCCACGCGTGCCGAGGGCAGCGACGTGGCCAACGCCGTTCTGGACGGAGCCGACTGCATCATGCTGAGCGGAGAGACGGCTAAAGGAGACTATCCTCTGGAGGCCGTCCGCACCCAGCACATGATCGCTCGCGAGGCGGAGGCGGCCATGTTCCACCGTCAGGTGTTTGAGGACCTGCGTCGCTGTTTGCCGCCCTCCACCGACCCCGCCGAGGCCATCGCCATTGGCGCTGTGGAGGCCTCCTTTAAAATCCTGTCCTCCGCGTTTATAGTCCTCACTGGGTCCGGCAGGTCCGCTCACCTGATCTCCCGGTATCGCCCGCGTGCCCCGATCATCGCCGTGACCCGTAACGAGCAGACGGCCCGACAGGCTCATCTGTACCGCGGCATCTTCCCCGTGCTCTACAACAAGGCTTCCAACGACGTGTGGGCCGAGGACGTGGACCTCAGGGTCAATTTTGCCATGGATGTCGgtAAGGCTCGTGGGTTCTTCAAGCCCGGTGATGTGGTGATCGTCCTGACCGGTTGGCGTCCAGGCTCTGGTTACACTAACACCATGCGTGTCGTCCCGGTGCAGTAAACAGGACTCCCGCTCTTCATACATCACTCCCttccttcatcatcttcatcttcatcacacGAGCCTGGCTCCCGGCCAGTGGACCACCGTCACTTAGACATTTGTTCTCACTGCTTTCACTTCCTCCCGAGTCTCGAGCGTAATCTCCCACCCGTTTCTCCCGGGCTGTCTGTCGGTGTGCATGCTTGTGAAGCCTTTGAACAAACAGCAGCTTCCTGAAGCGAGCGTGCGGCGGAGGGCTCAGGCGTACTGTAACTCTCCCgttagttttatttgtagtgTTTAGTCTGTCGTGTGCTTTATTTGTGTTCACTCTCCTAATGATGTTACATTCTTTGTTGCACTTGTCCATGAGACCATTTGATTTGGGACGGGGCGACCAAtgtgctatatattttttttgaaatgttaacatTGGGATGCCTCGTCCGGCTCATTTCAGTGTGAGTTAGAGAACGACAGAGTTTCTGATTGAGCAGCGTCGGTCACATTCCCAGCATCCATCGGTCCTGTCCTTCCCCTCACGACGCACTTGTTTGTCTCTGCTGctcctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagcgagtgtgtgttcAGATCTACCTGCTTTGTGTCGCTAGAGTGCAAGATGAACTTATAACTGTAAGAGTAAACTATAGTATCATTCTGAAGTGTTGTATTATTCAAGACTGAATTAATAAAGGAGATAAGCACCTGA

Function

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0016310 phosphorylation biological_process
GO:0030955 potassium ion binding molecular_function
GO:0000287 magnesium ion binding molecular_function
GO:0004743 pyruvate kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46812 lncRNA downstream 48622 28282039 ~ 28319833 (-) True LOC122343220
XR_006250730.1 lncRNA downstream 48899 28318778 ~ 28319556 (-) False LOC122343220
TU46905 lncRNA downstream 118348 28244990 ~ 28250107 (-) True G31765
TU46889 lncRNA downstream 140154 28226414 ~ 28228301 (-) False G31759
TU46922 lncRNA upstream 6627 28387241 ~ 28387769 (-) True G31777
TU46935 lncRNA upstream 21091 28401705 ~ 28405804 (-) False G31786
TU46934 lncRNA upstream 22457 28403071 ~ 28405804 (-) True G31786
TU46962 lncRNA upstream 141940 28522554 ~ 28526332 (-) True G31804
TU46954 lncRNA upstream 143024 28523638 ~ 28541749 (-) True G31798
XM_043237532.1 mRNA downstream 155408 28212246 ~ 28213047 (-) True LOC122343218
XM_043236295.1 mRNA downstream 181198 28181566 ~ 28187257 (-) False LOC122342472
XM_043236294.1 mRNA downstream 181198 28181567 ~ 28187257 (-) True LOC122342472
XM_043236297.1 mRNA downstream 190869 28171251 ~ 28177586 (-) True LOC122342473
XM_043236293.1 mRNA downstream 238075 28120247 ~ 28130380 (-) True LOC122342471
XM_043236155.1 mRNA upstream 573734 28954348 ~ 28956291 (-) True LOC122342383
TU46919 other downstream 3259 28364025 ~ 28365196 (-) True G31776
TU46883 other downstream 181677 28185330 ~ 28186778 (-) False LOC122342472
TU46793 other downstream 300693 28065297 ~ 28067762 (-) True eif1
TU46518 other downstream 723723 27642692 ~ 27644732 (-) True G31508
TU46510 other downstream 815862 27539355 ~ 27552593 (-) False G31503
TU47051 other upstream 463579 28844193 ~ 28846421 (-) True G31868
TU47079 other upstream 592739 28973353 ~ 29012765 (-) True G31890

Expression Profile