RNA id: XM_043236806.1


Basic Information

Item Value
RNA id XM_043236806.1
length 2590
RNA type mRNA
GC content 0.48
exon number 8
gene id adipor2
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 3678245 ~ 3701214 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGAGGGGCGTCACACTGAAACGCAAGGATATCGAGAAAATCCAGCCAGGTcgagtcagtcagtcagtcagtccgCTGGATCCGCAGCGCCACTCCGACAAAAACACACGCTTGAAGGACAACCGCTCGCCGCTTACGCAGACAGGTCCATCAGCGAGTCTCGCGTTCTGCTGTGAATCCACGGAGGACAGTTTTGGAGTCGAGCGCCCTCAGTGTGGTCTAGTAGCATTAAGAAAGAGCAGCAGCAACAGGAAGCAAGCTGGACGGGGGGGAGGTGAGGGAGGACGAGGGCGCCGCCTTTGTCCTGAGACACAGAGTCTGTACCACCAGTGACACTCCTGACCCAACCCACACATCCACCTCAAGCGGCCAAGACACCATGAGTGCCAGTGCAGACCACAGATCGGACGGCCCCGCACACAATGGGtgtctCTTTGTGAGGAGGGTGGTACATGAGAAGGAGGAGAAAACGACagaaagagaagaggaagaCGATGAGGAAGAAGACAAGAGCTCTGATGAAGGCCTCCTGCTACAGGCACACCATGCCATGGAGAGGATGGAGGAGTTTGTGCACAAGATGTGGGAGGGCAGATGGCGTGTCATTCCACATGATGTCCTCCCCGATTGGCTGAAGGATAATGATTTCCTTTTGCACGGTCACCGGCCTCCTATGCCCTCCTTCAGAGCTTGTTTCAAGAGCATCTTCAGAATCCATACAGAAACGGGCAACATTTGGACACATCTTCTAGGCTGCctgttctttctctgtctgGGCATTGTGTACATGTTCAGGCCCAATATGTCGTTTGTGGCCCCGTTCCAGGAGAAGATTGTCATCGGTGCGTTCTTCCTAGGAGCCATACTCTGCCTGTCCTTCTCCTGGGTCTTTCACACAGTCTACTGCCACTCAGAAGGGGTCTCCCGTGTTTTCTCAAAGTTAGACTACTCGGGCATTGCGTTCCTGATCATGGGCAGTTTTGTACCGTGGCTGTATTACTCTTTCTACTGCTCCCCTCAGCCCTGTTTTATATACCTGATAGTGGTGTGTATCCTGGGGATTGCTGCCATCACCGTCTCACAGTGTGATTTCTTTGCCACGCCACAGTACCGTGGAGTTAGGGCTGgtgtgtttgtgggTCTGGGCCTCAGTGGAGTCGTTCCCACGCTGCACTTTATGATCACCGAGGGCTTCCTGAAGGCCACGACCATGGGTCAGATGGGCTGGCTGTTCCTCATGGCCGTCCTGTACATCACCGGAGCCTGCCTGTACGCCGCGCGCATCCCAGAAAGATTCTTCCCTGGAAAGTGTGACATCTGGTTCCACTCCCATCAGCTGTTCCATATCCTGGTGGTAGCAGGTGCTTTCGTGCACTTCCACGGTGTGTCCAACCTGCAGGAGTTTCGTTACACAGCTGGCGGAGGCTGTGCGGAGGAGGGTGGGGCGTGAGCCCTGTGTCCTGCGGTGCTTGAAACGCACCACTAGAGGGAGACGACGTTCCTCTTACCTTTGCCGCCAACAAGTGTTCCTCCTTGCCCATGAGGGGTAAACCTAAGAGGACAGCACTGAACGACAAAGATACCCACCTTTATTATTTTTcgtattatttttctctttccgTTTTGGGTTTGTTCTCTGTTTTGCCCccttaaataaaatgcatcatgggATGAGGTGGACGCAGGTTGAGGATGGCAGTTTGTGTTTCCTAAGATCATACATTAAGAAAGAAGAGCTTTTTTGGCTTGGTCTATTGCCGTTTGATGGTCTATCgctgttttttctttgtacGAGAAAAagcgtcaaaaaaaaaaaaaaaaaaaaaaaaagcgagcaaaaacattttaaaaaatgcaaacgtGTGACCGTTTCTTGGGGTGGGCAGTTAgccattttaaacttttttcatgtaaataagATTTCTAAAATTTGGGTTATATAGATTTGTAcgaaaataaagttataaaatgtttttaaaaaaaacacatcattatatcattatatggTTTAACGAAGGTGAAAGAGAGAATGTGGGGAAAGAGAGCCGTGAGGCCTCGAGTCGGAAGCGGCCAACCAGAAGCCTCGGTGTTCTGTTATCCTAAGCACAGCTGTTAAGAGCTAAAAACGCACCTGTAGGCCGGTGGGACGCCCTGCACACGACGGAGCCGCCAGGATTCAGCGCTCACGTACTCCGCAGGCCTTCATATCGCTCTCAGTGCTGTTTCTTCCCACGCAGAAGGCCGGTTTCCCATCTTTATgattatttctctctctctgttctcgttttattcatctttgtgaATGTTGACTCAACctggtttggaaaaaaaatgaattgatgAAAGACTTGCTGTTTCAAAGTACACAAAATCATACTCGAGCAGTGCAAGGATACATCTGTTGTGTAATGTTCTGTGTTCACCATCTGTATGTGACATAATTTATTAAGGAGTGGGAAACATACAGCTTGTCCTACAAGCTGTAATATTCCACATTTAAACATGAGCaatgtttgttttctcagagatttttacatgcattgatatttattttaattttaaaataaacaaattaaaaaattaaaccgCT

Function

GO:

id name namespace
GO:0033211 adiponectin-activated signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0042562 hormone binding molecular_function

KEGG:

id description
K07297 ADIPOR; adiponectin receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37933 lncRNA upstream 130736 3546122 ~ 3547509 (+) True G25523
TU37903 lncRNA upstream 243783 3409001 ~ 3434462 (+) True G25502
TU37910 lncRNA upstream 249099 3420636 ~ 3429146 (+) True G25504
TU37829 lncRNA upstream 653481 3021063 ~ 3024764 (+) False G25456
TU37946 lncRNA downstream 214 3701428 ~ 3701754 (+) True G25534
TU37947 lncRNA downstream 620 3701834 ~ 3702371 (+) True G25535
TU37948 lncRNA downstream 5645 3706859 ~ 3707064 (+) True G25536
TU37949 lncRNA downstream 7323 3708537 ~ 3708852 (+) True G25537
XR_006250756.1 lncRNA downstream 105725 3806939 ~ 3807898 (+) True LOC122343347
XM_043237790.1 mRNA upstream 2952 3660617 ~ 3675293 (+) True LOC122343370
XM_043236953.1 mRNA upstream 77239 3579628 ~ 3601006 (+) True LOC122342820
XM_043236827.1 mRNA upstream 297073 3311653 ~ 3381172 (+) True LOC122342760
XM_043237555.1 mRNA downstream 59370 3760584 ~ 3769843 (+) True sult4a1
XM_043237747.1 mRNA downstream 188223 3889437 ~ 3895875 (+) True samm50l
XM_043237733.1 mRNA downstream 195863 3897077 ~ 3905931 (+) True aldh1l2
XM_043237744.1 mRNA downstream 207929 3909143 ~ 3959260 (+) False slc41a2b
XM_043237743.1 mRNA downstream 207929 3909143 ~ 3926881 (+) True slc41a2b
TU37922 other upstream 176151 3481629 ~ 3502094 (+) True G25514
unassigned_transcript_301 other upstream 207110 3470366 ~ 3471135 (+) True LOC122343352
unassigned_transcript_300 other upstream 230671 3447058 ~ 3447574 (+) True LOC122343393
unassigned_transcript_299 other upstream 236745 3440912 ~ 3441500 (+) True LOC122342809
unassigned_transcript_298 other upstream 238591 3439131 ~ 3439654 (+) True LOC122342808
TU37969 other downstream 36288 3737502 ~ 3738594 (+) True G25551
TU38369 other downstream 528415 4229629 ~ 4231092 (+) True G25837
TU38370 other downstream 531694 4232908 ~ 4235244 (+) True G25838
TU38543 other downstream 848949 4550163 ~ 4628899 (+) False G25958
TU38544 other downstream 848949 4550163 ~ 4628899 (+) True G25958

Expression Profile