Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043236826.1 |
| length | 1206 |
| RNA type | mRNA |
| GC content | 0.59 |
| exon number | 4 |
| gene id | LOC122342760 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 3311653 ~ 3381172 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0009826 | unidimensional cell growth | biological_process |
| GO:0002574 | thrombocyte differentiation | biological_process |
| GO:0031018 | endocrine pancreas development | biological_process |
| GO:0030182 | neuron differentiation | biological_process |
| GO:0045165 | cell fate commitment | biological_process |
| GO:0051209 | release of sequestered calcium ion into cytosol | biological_process |
| GO:0002062 | chondrocyte differentiation | biological_process |
| GO:0001525 | angiogenesis | biological_process |
| GO:0010172 | embryonic body morphogenesis | biological_process |
| GO:0048840 | otolith development | biological_process |
| GO:0048884 | neuromast development | biological_process |
| GO:0031101 | fin regeneration | biological_process |
| GO:0008591 | regulation of Wnt signaling pathway, calcium modulating pathway | biological_process |
| GO:0061053 | somite development | biological_process |
| GO:0060028 | convergent extension involved in axis elongation | biological_process |
| GO:0060030 | dorsal convergence | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005109 | frizzled binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37820 | lncRNA | upstream | 340634 | 2935162 ~ 3030892 (+) | True | G25455 |
| TU37823 | lncRNA | upstream | 346762 | 3017567 ~ 3024764 (+) | False | G25456 |
| TU37828 | lncRNA | upstream | 346762 | 3017567 ~ 3024764 (+) | False | G25456 |
| TU37830 | lncRNA | upstream | 346762 | 3017567 ~ 3024764 (+) | False | G25456 |
| TU37824 | lncRNA | upstream | 346762 | 3020883 ~ 3024764 (+) | True | G25456 |
| TU37903 | lncRNA | downstream | 27829 | 3409001 ~ 3434462 (+) | True | G25502 |
| TU37910 | lncRNA | downstream | 39464 | 3420636 ~ 3429146 (+) | True | G25504 |
| TU37933 | lncRNA | downstream | 164950 | 3546122 ~ 3547509 (+) | True | G25523 |
| TU37946 | lncRNA | downstream | 320256 | 3701428 ~ 3701754 (+) | True | G25534 |
| TU37947 | lncRNA | downstream | 320662 | 3701834 ~ 3702371 (+) | True | G25535 |
| XM_043236254.1 | mRNA | upstream | 64768 | 3119532 ~ 3306758 (+) | False | erc1b |
| XM_043236953.1 | mRNA | downstream | 198456 | 3579628 ~ 3601006 (+) | True | LOC122342820 |
| XM_043237790.1 | mRNA | downstream | 279445 | 3660617 ~ 3675293 (+) | True | LOC122343370 |
| XM_043236806.1 | mRNA | downstream | 297073 | 3678245 ~ 3701214 (+) | True | adipor2 |
| XM_043237555.1 | mRNA | downstream | 379412 | 3760584 ~ 3769843 (+) | True | sult4a1 |
| XM_043237747.1 | mRNA | downstream | 508265 | 3889437 ~ 3895875 (+) | True | samm50l |
| XR_006250571.1 | other | upstream | 64768 | 3119529 ~ 3306758 (+) | False | erc1b |
| TU37871 | other | upstream | 253538 | 3115508 ~ 3117988 (+) | True | ninj2 |
| TU37230 | other | upstream | 1583430 | 1784292 ~ 1788096 (+) | True | LOC122342451 |
| TU37269 | other | upstream | 1698567 | 1670512 ~ 1672959 (+) | True | LOC122343488 |
| TU37077 | other | upstream | 2080302 | 1288312 ~ 1291224 (+) | True | ndufa5 |
| unassigned_transcript_298 | other | downstream | 57959 | 3439131 ~ 3439654 (+) | True | LOC122342808 |
| unassigned_transcript_299 | other | downstream | 59740 | 3440912 ~ 3441500 (+) | True | LOC122342809 |
| unassigned_transcript_300 | other | downstream | 65886 | 3447058 ~ 3447574 (+) | True | LOC122343393 |
| unassigned_transcript_301 | other | downstream | 89194 | 3470366 ~ 3471135 (+) | True | LOC122343352 |
| TU37922 | other | downstream | 100457 | 3481629 ~ 3502094 (+) | True | G25514 |
