RNA id: XM_043236947.1


Basic Information

Item Value
RNA id XM_043236947.1
length 2163
RNA type mRNA
GC content 0.51
exon number 12
gene id nampt1
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 917582 ~ 931678 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACCTCGCCCTCCGCAATGACGTCTGAGTCACCTTGTCCCCTGATTGGCCAGTCCGCCCGACTCGGTCCCGCCCATTCCGATTCCGTCATCCGCCCTCCTCGTCGACGGGGGTTGGTTGAGAGTCCTCGCGGCGGAGAGCGAACAACAGAGCTGACAGCAGCGCGCGACTCCAGTCACGTCAAGGGGAAGATGGAGCAGCACACGGGCGCCGCGGAGTTCAACATCTTGCTAGCCACCGACTCCTATAAGGTCACACATTACAAACAGTACCCACCCAACACCAGCAAGGTGTACTCTTACTTTGAGTGCCGCGAGAAGAAGACAGACCCTACCAAGCTCAGAAAAGTCAAATACGACAAAACGGTCTTCTATGGGCTTCAGTACATTCTCCACAGATATTTAAAAGGACAAGTCGTCACACGAGAGAAGATCCAGGAAGCAAAAGAGGTGTACCGGGAGCACTTTCAGGATGATGTGTTCAATGAAAAAGGATGGAATTACATATTGGAGAAATACAACGGTCACCTGCCCATCGAGATCAAGGCTGTGCCGGAGGGAAGCGTTATCCCTCGTGGGAATGTGCTGTTCACCGTAGAAAGCACAGATCCAGAGTGCTACTGGCTCACTAACTGGGTAGAGACCATCCTGGTTCAGATCTGGTACCCCATCACCGTGGCGACGAACTCACGAGAACAGAAGAAGATTCTGGCCAAATATCTCATGGAAACGTCAGGAAGCCTGGAAGGACTGGAATATAAACTGCATGACTTTGGCTACAGAGGGGTTTCATCTCAAGAGACGGCCGGTATCGGAGCATCTGCACACTTGGTAAACTTCAAAGGAACAGACACTGTTGCCGGGATCGGCGTTATCAAGAAGTACTACGGCACCAAAGACCCGGTTCCTGGTTTCTCAGTTCCAGCTGCAGAACACAGCACAATCACTGCCTGGGGAAAGGACCACGAGAAGGATGCGTTTGAGCACATCATCCAGCAGTTCCCTTCTGTCCCCGTGTCAATCGTCAGCGACAGCTACGACATCTACAACGCCTGCGAAGCTGGGGAGGACCTGAGGAGTCTGATCGAGATGAGGCGCAGACGCCCGCTGGTGGTCCGGCCGGATTCAGGAAACCCTCTAGACACAGTGCTAAAGGTCCTAGAAATTTTAGGAAAGAAATTTCCACTGATTGAGAACTCTAAAGGCTATAAGGTGCTTCCGCCCTACATCCGAGTCATTCAGGGCGACGGTGTAGACATCAATACTTTACAGGAGATTGTGGAGGGCATGAAAGAGCACAGATGGAGCATCGAGAACATCGCGTTTGGCTCAGGAGGAGCTCTACTGCAGAAACTGACCCGAGATCTCCTCAACTGCTCTTTTAAGTGCAGTTACGTGGTGACAAACGGACTGGGTGTCAACGTCTTCAAAGACCCTGTTGCAGACCCCAACAAAAGGTCAAAGAAGGGCCGGCTTTCTCTTCACAGGACACCAAGTGGAGATTTTGTTACTCTGGAAGAGGGCAAGGGTGATCTGGAGGAATACGGAGAGGACTTGCTGCACACGGTGTTCAGGAACGGGAAGATTGTAAAGACCTACACCTTCGATGAGGTCAGAGACAATGCCAAGCTGAAGGAGAGCGAACTGGAGGACCTGCTGCTCTGAGAGCGTCTCCCATCAGCCCTCTCTCCACCCACACCCACCCGACAGACGTGAGGACACCCGGTCACCCCACGTTCGGTGTACAGAGCCGTTCTATGTTTCTGTCTACTGACTCCGCTACGCTTCAGTGTCTCTTTCTAACGGCGGATGAGAGCAGATACCGTgctatttaaatcatttaactgTGTATTTGACCAAGCGTGCTATTGATCACACGTCTTTGCAGGAATGGAGACGTTTATGTGTGCGTTAACTGCGAGAAGATTTCGCTTTGCTTGACTGTAGGACTGAAAGGTAATCGTTCCGTGTTTGTTGAATGTGAATGTTGTGTGTAGGGTTTATCACTTTATCCAAGGATTGATCTATTCCTTTATGCAAAGGAGACGGCTGAGCTAGAGGGACGCTTTCATTGTCTTTCGTTGACTTTGTGTTTACTTGATTTCTGGTTTTTACGTGAAAGATGAAACCTGCAAGAGCATGTTTAGGCCGCTTAagactcaaaat

Function

GO: NA

KEGG:

id description
K03462 NAMPT; nicotinamide phosphoribosyltransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36856 lncRNA upstream 265989 649509 ~ 651593 (+) True G24768
TU36846 lncRNA upstream 292357 623251 ~ 625225 (+) True G24758
TU36839 lncRNA upstream 297886 619477 ~ 619696 (+) True G24754
TU36836 lncRNA upstream 301726 615600 ~ 615856 (+) True G24751
TU36831 lncRNA upstream 310068 607287 ~ 607514 (+) True G24746
XR_006250559.1 lncRNA downstream 181217 1112895 ~ 1127380 (+) True LOC122342413
TU37037 lncRNA downstream 315702 1247380 ~ 1249169 (+) False LOC122342481
TU37074 lncRNA downstream 354934 1286612 ~ 1287073 (+) True G24925
TU37102 lncRNA downstream 397787 1329465 ~ 1331843 (+) True LOC122342419
TU37142 lncRNA downstream 624714 1556392 ~ 1557778 (+) True G24968
XM_043236970.1 mRNA upstream 9258 890697 ~ 908324 (+) False fgd4b
XM_043236971.1 mRNA upstream 9258 891964 ~ 908324 (+) True fgd4b
XM_043236967.1 mRNA upstream 28823 867196 ~ 888759 (+) False LOC122342829
XM_043236948.1 mRNA downstream 2368 934046 ~ 937823 (+) True sypl1
XM_043236945.1 mRNA downstream 7482 939160 ~ 957350 (+) True atxn7l1
XM_043236944.1 mRNA downstream 7482 939160 ~ 957350 (+) False atxn7l1
XM_043237157.1 mRNA downstream 26656 958334 ~ 969359 (+) True znf800b
XM_043237158.1 mRNA downstream 26679 958357 ~ 969359 (+) False znf800b
TU36860 other upstream 252052 654092 ~ 665530 (+) True G24771
TU36683 other upstream 543500 373527 ~ 374082 (+) True G24632
TU36680 other upstream 543758 373527 ~ 373824 (+) False G24632
TU36656 other upstream 622513 293235 ~ 295069 (+) True G24609
TU36577 other upstream 832620 83688 ~ 84962 (+) True G24555
TU37077 other downstream 356634 1288312 ~ 1291224 (+) True ndufa5
TU37269 other downstream 738834 1670512 ~ 1672959 (+) True LOC122343488
TU37230 other downstream 852614 1784292 ~ 1788096 (+) True LOC122342451
TU37871 other downstream 2183830 3115508 ~ 3117988 (+) True ninj2
XR_006250571.1 other downstream 2187851 3119529 ~ 3306758 (+) False erc1b

Expression Profile