RNA id: XM_043237034.1


Basic Information

Item Value
RNA id XM_043237034.1
length 2458
RNA type mRNA
GC content 0.50
exon number 15
gene id pfkfb3
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13268075 ~ 13275474 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATAATCGTTTAAAAATCAACAAGCTTGGGAATTTACAGCCCGAAGACGCTTGCTATTATTTCACGGGTTTATGGAGATTGATGGATTGATGTAGTGACTCCCCGCACGTAGGCAAGCGGGGATGCCCACTCGACGCGTGACCTGCATCTTTAATGCTCTCGAGCGCGCAGCGCCTTACAAGCCCTTTTTAATCATTTGCGCGTATCACGCGCGTCTAGAAatgtgacaataataataaacaataataataaatggcatGTTATTGAAACGCGTGGATGTAAATTGTGAACACCGTAgccttatatttatttttttcgtaACGACCAACATCCACCATTCGGCCGCAAAGCGGCGCACGTGGACGCCGTGACCGGCAGGCCCCGCCCTCCGCCAGCGCGTCACGGCATCGTGTCGCCGGTTCCGTATTTAAAGCGCGGACGGCGAGGGACGTGCCGTTAGAGATTACCGGGAAGCAAAAGAGAGGAGGTCTTCGAAATTTTTAACTGATACAAGTCGGCGCTAGTCGTTCGAAGAAGAAGGTTTGCAAAGAAGGGCGTCTTTAATTCTAGACGTTTTGGAGTTTCCGAAGCCGGTGTGTAacgtgctgctgctgctgctgtgttcCTGCTGATTTTTCCCAATCCTAAAGGAATGCCAAGGGAACTAACACAGAACAGGATCCAAAAAATCTGGATTCCCTCTAAGGATGACAAACCTTCAATGCCCCGCACATcacGCGGAGGCCCCCACCTGGCGAACCCCCCGACAGTGATAGTGATGGTAGGGCTCCCCGCTCGGGGCAAAACCTACATTTCAAGAAAACTCACACGCTACCTCAACTGGATTGGGATTCCcacaaaagtttttaacgtCGGAGAGTATCGACGAGAGGCTGTGAAACACTACAGCTCTTATGATTTCTTCAAATCGGACAATGAGGATGCTGTAAAAATCCGACAgcAGTGTGCCTTGGCCGCTCTGAGAGATGTCAAGAATTACCTCACCGAAGAGGAAGGTCAAGTGGCTGTTTTTGATGCTACAAACACGACCAGAGAGCGACGAGATATGATTCTAGATTTCGGTGCAGAAAACGGCTTCAAGATCTTCTTCATTGAGTCTGTTTGTGACGACCCAAATGTAATCGCCTGTAATATCTTGGAAGTTAAAGTGTCATGTCCTGACTATCAAGATTGCAACAAGACGGATGCCATGGAGGACTTTAAGAAAAGAATCGAATGTTACAGAATGAACTATCAGCCACTCGACCCTGACCAACATGACAAAAACCTGTCCTTCATCAAAGTGATCGACGTGGGTCGTAGATTCCTGGTGAACCGCATTCAAGACCACATCCAGAGTCGGATCGTCTACTACCTGATGAACATCCACGTGCAGCCGCGGTCTATTTATTTGTGTCGCCACGGCGAGAGCCAACACAACCTGCAGGGCAGACTGGGCGGAGACTCCGGACTGTCTACACGTGGACGCAAGTTCGCAGGAGCTCTTGCTAAGTTTGTGGAGGAGCAGAACTTGAAGGACTTGAAGGTTTGGACGAGCCAGCTGCGCCGTAGCATCCAAACCGCCGAGGCCCTCAACGTGCCGTACGAGCAGTGGAAAGCGTTGAATGAGATCGATGCTGGTGTGTGTGAGGAGATGACTTACGAAGAAGTCAGAGAGAGGTTTCCAGAAGAGTTTGCTCTCAGAGATCAAGATAAATACTACTACCGCTATCCCTCTGGAGAGTCATATCAGGATTTGGTTCAGCGGGTGGAACCCGTGATCATGGAACTGGAACGACAGGAAAACGTTCTTGTCGTTTGCCATCAGGCAGTGATGCGCTGCCTGTTAGCCTACTTCCTGGACAAAAGTGCAGACGAAATGCCGTACCTGAAGTGTCCTCTCCACACAGTACTGAAGCTCACCCCAGTAGCTTACGGGTGCAAAGTTGAATCCATCTCTCTGAATGTGGATGccgtgaacacacacagagaccgACCGGAGGAGGTGAAGAGAGGCccgagcactttgatcaggagAAACAGCGTGACCCCTCTCACCAGTCCTGAGCCCAATAAGAAGCCCCGCATCGAGGGTCTGGATGAAGCGATCTTCAGAGAGGTGACGCCCGCCCAGCTGACCCTGTGCTCAGCGTCACACACCACTCTCGCTCTGTCCACGCAGaaCCTGAAGAAAAGCCCCACAGAGTGCCACGAACCCCCTCAGCTCTGCCTGTGAGATTTTAAGGCTACGTTGCTTTTATTCAGCGCGGAAGAGTTTCCTGCCGAGCTGCTTCCTCCCGGAGAGACGCTGTGTGTCCCTCTCCCAAATGTGGACACTGAGCGCAACCCGGGTTTTTCTATTTCTCCTTCACGAGTTCGTGATTTAATGTGCGTATGGCGTGGTTTGTCCTAGTAAGGAGTTCAGTGTGGTTTTTTTTGAGTATGAAGGGAAATTAGAG

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0006000 fructose metabolic process biological_process
GO:0006003 fructose 2,6-bisphosphate metabolic process biological_process
GO:0003873 6-phosphofructo-2-kinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU42039 lncRNA downstream 16041 13250651 ~ 13252034 (-) True G28359
TU42040 lncRNA downstream 16041 13250651 ~ 13252034 (-) False G28359
TU42033 lncRNA downstream 22687 13242506 ~ 13245388 (-) True G28353
TU42028 lncRNA downstream 38756 13229094 ~ 13229319 (-) True G28350
TU42027 lncRNA downstream 40128 13227700 ~ 13227947 (-) True G28349
TU42067 lncRNA upstream 36492 13311873 ~ 13319748 (-) True G28377
XR_006250599.1 lncRNA upstream 68345 13343726 ~ 13344257 (-) True LOC122342564
TU42094 lncRNA upstream 152647 13428028 ~ 13432669 (-) True G28397
TU42096 lncRNA upstream 152783 13428164 ~ 13432703 (-) False G28397
TU42147 lncRNA upstream 334835 13610216 ~ 13612771 (-) True G28434
XM_043236651.1 mRNA downstream 81185 13177020 ~ 13186890 (-) True tmem110l
XM_043236342.1 mRNA downstream 103952 13152421 ~ 13164123 (-) False itih2
XM_043236341.1 mRNA downstream 103952 13154146 ~ 13164123 (-) True itih2
XM_043236345.1 mRNA downstream 117369 13146654 ~ 13150706 (-) True atp5f1c
XM_043236447.1 mRNA upstream 5802 13281183 ~ 13301329 (-) False rbm17
XM_043236444.1 mRNA upstream 5802 13281183 ~ 13301329 (-) True rbm17
XM_043236445.1 mRNA upstream 5802 13281183 ~ 13289706 (-) False rbm17
XM_043236446.1 mRNA upstream 5802 13281183 ~ 13289665 (-) False rbm17
XM_043236432.1 mRNA upstream 70574 13345955 ~ 13361937 (-) True tmcc3
TU41785 other downstream 778919 12481920 ~ 12489156 (-) False cpm
TU41786 other downstream 778919 12482102 ~ 12489156 (-) False cpm
TU41650 other downstream 1252308 12014631 ~ 12015767 (-) True G28093
XR_006250735.1 other downstream 1722263 11426497 ~ 11545812 (-) False ppfia2
TU41528 other downstream 1843992 11422069 ~ 11424083 (-) False ppfia2
XR_006250598.1 other upstream 41551 13316932 ~ 13361938 (-) False tmcc3
XR_006250597.1 other upstream 41551 13316932 ~ 13361938 (-) False tmcc3
XR_006250596.1 other upstream 49144 13324525 ~ 13361938 (-) False tmcc3
TU42098 other upstream 136243 13411624 ~ 13422539 (-) False G28397
XR_006250767.1 other upstream 417564 13692945 ~ 13698715 (-) False LOC122343399

Expression Profile