RNA id: XM_043237036.1


Basic Information

Item Value
RNA id XM_043237036.1
length 2577
RNA type mRNA
GC content 0.48
exon number 16
gene id pfkfb3
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 13268075 ~ 13275474 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGATACGGAAATAAAACGCGCTTATTATTTTACGCTTAGCCTATGAGTTCGCCCTTGCAtccattattaatttattgctttttattgccGGAAATAATCGTTTAAAAATCAACAAGCTTGGGAATTTACAGCCCGAAGACGCTTGCTATTATTTCACGGGTTTATGGAGATTGATGGATTGATGTAGTGACTCCCCGCACGTAGGCAAGCGGGGATGCCCACTCGACGCGTGACCTGCATCTTTAATGCTCTCGAGCGCGCAGCGCCTTACAAGCCCTTTTTAATCATTTGCGCGTATCACGCGCGTCTAGAAatgtgacaataataataaacaataataataaatggcatGTTATTGAAACGCGTGGATGTAAATTGTGAACACCGTAgccttatatttatttttttcgtaACGACCAACATCCACCATTCGGCCGCAAAGCGGCGCACGTGGACGCCGTGACCGGCAGGCCCCGCCCTCCGCCAGCGCGTCACGGCATCGTGTCGCCGGTTCCGTATTTAAAGCGCGGACGGCGAGGGACGTGCCGTTAGAGATTACCGGGAAGCAAAAGAGAGGAGGTCTTCGAAATTTTTAACTGATACAAGTCGGCGCTAGTCGTTCGAAGAAGAAGGTTTGCAAAGAAGGGCGTCTTTAATTCTAGACGTTTTGGAGTTTCCGAAGCCGGTGTGTAacgtgctgctgctgctgctgtgttcCTGCTGATTTTTCCCAATCCTAAAGGAATGCCAAGGGAACTAACACAGAACAGGATCCAAAAAATCTGGATTCCCTCTAAGGATGACAAACCTTCAATGCCCCGCACATcacGCGGAGGCCCCCACCTGGCGAACCCCCCGACAGTGATAGTGATGGTAGGGCTCCCCGCTCGGGGCAAAACCTACATTTCAAGAAAACTCACACGCTACCTCAACTGGATTGGGATTCCcacaaaagtttttaacgtCGGAGAGTATCGACGAGAGGCTGTGAAACACTACAGCTCTTATGATTTCTTCAAATCGGACAATGAGGATGCTGTAAAAATCCGACAgcAGTGTGCCTTGGCCGCTCTGAGAGATGTCAAGAATTACCTCACCGAAGAGGAAGGTCAAGTGGCTGTTTTTGATGCTACAAACACGACCAGAGAGCGACGAGATATGATTCTAGATTTCGGTGCAGAAAACGGCTTCAAGATCTTCTTCATTGAGTCTGTTTGTGACGACCCAAATGTAATCGCCTGTAATATCTTGGAAGTTAAAGTGTCATGTCCTGACTATCAAGATTGCAACAAGACGGATGCCATGGAGGACTTTAAGAAAAGAATCGAATGTTACAGAATGAACTATCAGCCACTCGACCCTGACCAACATGACAAAAACCTGTCCTTCATCAAAGTGATCGACGTGGGTCGTAGATTCCTGGTGAACCGCATTCAAGACCACATCCAGAGTCGGATCGTCTACTACCTGATGAACATCCACGTGCAGCCGCGGTCTATTTATTTGTGTCGCCACGGCGAGAGCCAACACAACCTGCAGGGCAGACTGGGCGGAGACTCCGGACTGTCTACACGTGGACGCAAGTTCGCAGGAGCTCTTGCTAAGTTTGTGGAGGAGCAGAACTTGAAGGACTTGAAGGTTTGGACGAGCCAGCTGCGCCGTAGCATCCAAACCGCCGAGGCCCTCAACGTGCCGTACGAGCAGTGGAAAGCGTTGAATGAGATCGATGCTGGTGTGTGTGAGGAGATGACTTACGAAGAAGTCAGAGAGAGGTTTCCAGAAGAGTTTGCTCTCAGAGATCAAGATAAATACTACTACCGCTATCCCTCTGGAGAGTCATATCAGGATTTGGTTCAGCGGGTGGAACCCGTGATCATGGAACTGGAACGACAGGAAAACGTTCTTGTCGTTTGCCATCAGGCAGTGATGCGCTGCCTGTTAGCCTACTTCCTGGACAAAAGTGCAGACGAAATGCCGTACCTGAAGTGTCCTCTCCACACAGTACTGAAGCTCACCCCAGTAGCTTACGGGTGCAAAGTTGAATCCATCTCTCTGAATGTGGATGccgtgaacacacacagagaccgACCGGAGGAGGTGAAGAGAGGCccgagcactttgatcaggagAAACAGCGTGACCCCTCTCACCAGTCCTGAGCCCAATAAGAAGCCCCGCATCGAGGGTCTGGATGAAGCGATCTTCAGAGAGGTGACGCCCGCCCAGCTGACCCTGTGCTCAGCGTCACACACCACTCTCGCTCTGTCCACGCAGCACTGGCTTAGCGAAGCTTGTCTACGTACTTTTTTACATTATCTACAAGTGGTGTCGGTGCTGCTCTTTCAGAGGTAATAGTCGTTGAAACTAGCGTGGTGGAGTAGCTATTGCAAATTCGTTTGAATAGTAAATAGTATTTGCAGACTGCGAACACATTTCATGcctgatttaaatgttaaactgaGGCAGAATGGGCCCTGTTTACACTTGATTTTAACATCTGGTGTTTATCGCTAACACAGATGCTAATACCGGAACAACAGGGTTACAATTAGCTAAAAGCATTAGCCAAAATAAACT

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0006000 fructose metabolic process biological_process
GO:0006003 fructose 2,6-bisphosphate metabolic process biological_process
GO:0003873 6-phosphofructo-2-kinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity molecular_function

KEGG:

id description
K01103 PFKFB3; 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU42039 lncRNA downstream 16500 13250651 ~ 13252034 (-) True G28359
TU42040 lncRNA downstream 16500 13250651 ~ 13252034 (-) False G28359
TU42033 lncRNA downstream 23146 13242506 ~ 13245388 (-) True G28353
TU42028 lncRNA downstream 39215 13229094 ~ 13229319 (-) True G28350
TU42027 lncRNA downstream 40587 13227700 ~ 13227947 (-) True G28349
TU42067 lncRNA upstream 36399 13311873 ~ 13319748 (-) True G28377
XR_006250599.1 lncRNA upstream 68252 13343726 ~ 13344257 (-) True LOC122342564
TU42094 lncRNA upstream 152554 13428028 ~ 13432669 (-) True G28397
TU42096 lncRNA upstream 152690 13428164 ~ 13432703 (-) False G28397
TU42147 lncRNA upstream 334742 13610216 ~ 13612771 (-) True G28434
XM_043236651.1 mRNA downstream 81644 13177020 ~ 13186890 (-) True tmem110l
XM_043236342.1 mRNA downstream 104411 13152421 ~ 13164123 (-) False itih2
XM_043236341.1 mRNA downstream 104411 13154146 ~ 13164123 (-) True itih2
XM_043236345.1 mRNA downstream 117828 13146654 ~ 13150706 (-) True atp5f1c
XM_043236447.1 mRNA upstream 5709 13281183 ~ 13301329 (-) False rbm17
XM_043236444.1 mRNA upstream 5709 13281183 ~ 13301329 (-) True rbm17
XM_043236445.1 mRNA upstream 5709 13281183 ~ 13289706 (-) False rbm17
XM_043236446.1 mRNA upstream 5709 13281183 ~ 13289665 (-) False rbm17
XM_043236432.1 mRNA upstream 70481 13345955 ~ 13361937 (-) True tmcc3
TU41785 other downstream 779378 12481920 ~ 12489156 (-) False cpm
TU41786 other downstream 779378 12482102 ~ 12489156 (-) False cpm
TU41650 other downstream 1252767 12014631 ~ 12015767 (-) True G28093
XR_006250735.1 other downstream 1722722 11426497 ~ 11545812 (-) False ppfia2
TU41528 other downstream 1844451 11422069 ~ 11424083 (-) False ppfia2
XR_006250598.1 other upstream 41458 13316932 ~ 13361938 (-) False tmcc3
XR_006250597.1 other upstream 41458 13316932 ~ 13361938 (-) False tmcc3
XR_006250596.1 other upstream 49051 13324525 ~ 13361938 (-) False tmcc3
TU42098 other upstream 136150 13411624 ~ 13422539 (-) False G28397
XR_006250767.1 other upstream 417471 13692945 ~ 13698715 (-) False LOC122343399

Expression Profile