RNA id: XM_043237077.1


Basic Information

Item Value
RNA id XM_043237077.1
length 1371
RNA type mRNA
GC content 0.44
exon number 10
gene id nudt5
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 2935107 ~ 2938017 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACAAGCCGATGCGCCGCACGAGGGGAGGAACTGTTTTAGCGGCACACATGTAGGCAGATACGGAACATGTGACTAATTGGAAGAAAACTAACTAAACTGGACAGATCACTTGTGACTTTTTTGACGTACATAACGATTTCTCAGAATTACTGTAGCTGTCCCAGAGCTTCCTTCACTGATCGCCTGCACAACATGAGCTCTCCGAAGAAAGAGACTACTGAACCTCATGTCATCAAAGAGGAGCTGATAGCGAGTGGAAAATGGGTGAAGCTTGAGAAGACCACATATGTGGATCCCTCTGGAAGCACCAGAACTTGGGAAACGGCGAAGAGAACAACCCGAGTGGCCAACAGCGCAGCCGACGGCGTAGGGATCATAGCCCTTCTGAAGAGGACTCTGCATAAAGACTGCGTTGTAATGGTGAAGCAGTTTCGACCACCCATGGGATGCGTCGCGCTGGAGTTTCCCGCAGGTCTGATAGATGACAACGAGAGCGTGGAAGCCGCTGCTTTGAGGGAGCTAAAGGAGGAAACGGGTTACAAAGGGGAGGTGGTGGGCGTCACTCCAGTCACGTGTTTAGACCCGGGCCTGTCTAACTGCACCACACAGATGGTGATGGTAAACATCAACGGAGATGACCTCGAAAATATAAACCCCACTCAGCAGCTGGGCGATGGAGAATTTGTGGAGGTTATCCTTTTACCTCTGGATGAATTTCAGCACAAAATTGACGaaagagaaaatagCGGTGGACTCCAAGGTGTATATTTATGCTATGGGGATGTCGCAGGCCTTCTTTAAGCCCAGAGAGCTGCCTGTGCTGAAGCAGTGAGATCAGATCTCTCACCTGGAATACACTAAAGACAGCTACCGTGAGCTGATGAAATCTACCAATACTTGACCATGGCCTTAGTGTTTGGCATCGGTTGCCTGAACATTCCTAATAAACTAACTAAGTGCTTAATTAAGAGGTATTCGGAGTTTGCACAGTcttaaaattaatcattaaatatagGAATATATAGAAACTGACCAAACTAAAAAGTGCAGGTCTATTCTGTTAACCTTTTGAGTATGCCCTGTTTAATGTTGACctgtaatgacaaaaaaaaaaaaaaatccttgaaaagataataagcataaaatatttataggtCAAAACACTAGGTGTCACGCGAAGAAAGGACGTATGACAGTATTATGATCAGGACTTGGAATAAATCTCTCAAAAGGGTATTTTTGATGTATGTTTACTGCGATACGCAGGTAATTCTTGAACTTTAGTTTATGCTGGACGATGCATGAGCAACGCTGTGTTCCTGTATAACTATGAATTTTTATCTAATAAATTTgatagtttacatttttgca

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250774.1 lncRNA downstream 397101 2534205 ~ 2538006 (-) True LOC122343423
TU37715 lncRNA downstream 397649 2535072 ~ 2537458 (-) False LOC122343423
TU37702 lncRNA downstream 462073 2472284 ~ 2473034 (-) False LOC122342907
XR_006250773.1 lncRNA downstream 645988 2279226 ~ 2289119 (-) True LOC122343417
TU37692 lncRNA downstream 651329 2283285 ~ 2283778 (-) True G25362
TU38074 lncRNA upstream 42142 2980159 ~ 2996458 (-) True G25625
TU38062 lncRNA upstream 68753 3006770 ~ 3012214 (-) True ccdc3a
XR_006250573.1 lncRNA upstream 178387 3116404 ~ 3117297 (-) True LOC122342459
XR_006250572.1 lncRNA upstream 179462 3117479 ~ 3119550 (-) True LOC122342458
TU38132 lncRNA upstream 442641 3380658 ~ 3676399 (-) True G25673
XM_043237074.1 mRNA downstream 131 2927805 ~ 2934976 (-) False mcm10
XM_043237073.1 mRNA downstream 131 2927805 ~ 2934976 (-) True mcm10
XM_043236335.1 mRNA downstream 30818 2863140 ~ 2904289 (-) True cdk17
XM_043236333.1 mRNA downstream 30964 2863140 ~ 2904143 (-) False cdk17
XM_043236334.1 mRNA downstream 30969 2863140 ~ 2904138 (-) False cdk17
XM_043237124.1 mRNA upstream 61865 2999882 ~ 3006792 (-) False ccdc3a
XM_043237125.1 mRNA upstream 74749 3012766 ~ 3013359 (-) True si:ch211-240l19.8
XM_043237663.1 mRNA upstream 79615 3017632 ~ 3018211 (-) True LOC122343283
XM_043236920.1 mRNA upstream 81075 3019092 ~ 3021512 (-) True LOC122342805
XM_043237574.1 mRNA upstream 86231 3024248 ~ 3024825 (-) True LOC122343240
XR_006250644.1 other downstream 559391 2302327 ~ 2375716 (-) False dock4b
XR_006250645.1 other downstream 559391 2304346 ~ 2375716 (-) False dock4b
XR_006250653.1 other downstream 846528 2042953 ~ 2088579 (-) True cald1a
TU37444 other downstream 1032540 1901843 ~ 1902567 (-) False rsph9
TU37319 other downstream 1280300 1653591 ~ 1654807 (-) False ccdc167
TU38086 other upstream 83045 3021062 ~ 3021457 (-) False LOC122342805
TU38175 other upstream 596820 3534837 ~ 3547467 (-) False LOC122342819
TU38177 other upstream 610209 3548226 ~ 3577096 (-) False LOC122342819
TU38193 other upstream 662983 3601000 ~ 3601974 (-) False LOC122342822
TU38194 other upstream 664341 3602358 ~ 3604270 (-) False LOC122342823

Expression Profile