RNA id: XM_043237156.1


Basic Information

Item Value
RNA id XM_043237156.1
length 2912
RNA type mRNA
GC content 0.53
exon number 10
gene id grm8a
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 970135 ~ 1111519 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTTCCAGGAAGTGACATCGTTGTGGAAGGAGAACAACAGCACTAGCAGATTCCTCAGATCAGCTATGCATCCACGGCTCCGGAGCTGAGCGATAACACCCGCTACGACTTTTTTTCCCGCGTCGTTCCACCGGATTCCTACCAGGCCCAGGCCATGCTGGATATCGTCACGGCGATGGGCTGGAACTACGTCTCCACGCTGGCTTCCGAAGGGAACTACGGGGAGAGCGGCGTGGAAGCGTTCGTGCAGATCTCCAGAGAGATGGGTGGCGTGTGTATCGCTCAGTCTCTGAAGATCCCTCGGGAGCCGAGGCCTGGGGAATTCGACAAGATCATCCGCCGCCTCCTGGAGACCCCCAACGCCCGGGCCATCATCATGTTCGCAAACGAGGACGATATCAGACGAGTGCTGGATGCCGCCAAGAGGAGCAACCAGACGGGTCATTTCCTGTGGGTGGGGTCTGACAGCTGGGGCTCCAAGATCTCGCCGGTCATTCAGCAGGAGAGGGTGGCAGAAGGAGCCATCACCATCCTGCCCAAACGTGCCACGGTGGAGGcgTTCGATCGCTACTTCCGGAGCCGCTCGCTCTCCAACAACAGAAGAAACGTGTGGTTTGCTGAGTTCTGGGAGGAGAACTTTGGATGCAAGCTGGGGATGCACGGAAAGCGGCCGGGAAGCCTTAAAAAGTGCACCGgtcTGGAGAAGGTGGGCCGCGATTCCAGCTACGAGCAGGAAGGCAAGGTGCAGTTCGTGATGGACGCGGTTTATGCCATGGCACACGCTCTGCACCGCATGCACAGGGACTACTGCTTCGGATACCCCGGCCTCTGCCCTCGCATGAGCAATATCAACGGGAAGGAGCTGCTGGGATACATCCGGAACGTTAATTTCAATGGAAGTGCAGGCACTCCGGTGGTCTTCAATCTGAACGGAGATGCGCCTGGGCGATACGACATCTTCCAGTATCAGATCACCAACAAATCGACGGCTGAGTACAAAGTGATCGGCCAGTGGACAAACAAATTGCATCTTAATGTGGATGCCATGCGCTGGCGGACAGGTGACCCCACGCTTCCAGTCTCGGTGTGCAGTGTGCCTTGCCAGATGGGTGAAAGGAAGAAGATTGTGAAGGGTGTACCTTGCTGCTGGCATTGTGAGCGATGCGAAGGCTACCACTTCCAAGCCAGTGAATTCAGTTGTGAGTTGTGTCCGTACGAGCAGCGTCCTGACCGCAATCGCACCTGTTGCATCCCCATTCCAATCATCAAACTCGAATGGCACTCTGCTTGGGCGGCCGTGCCAGTGTTCGTCGCAGTTCTTGGAATCCTGGCTACAAGTTTTGTAGTGGTCACTTTCGTCCGCTACAATGACACACCGATTGTCCGAGCATCCGGCCGAGAGATGAGCTACGTGCTTCTGACTGGGATTTTTCTGTGCTACGCCATCACCTTCTTGATGATCGCCACACCAAGTTTGGGCGTCTGCTCTTTCCGAAGGGTGTTCCTGGGTTTGGGCATGTGCTTCAGCTATGCTGCTCTCCTAACAAAGACCAACCGCATCCACCGCATCTTTGAGCAAGGCAAGAAGTCGGTGGCTGCACCACGCTTCATCAGCCCTGCTTCCCAGCTGGTCATAACCTTCAGCCTGATCTCGGTGCAGCTGCTCGGTGTGTTCGTGTGGTTTGCTGTCGATCCGCCGCACACAGTGGTGGACTACGGCGAACAGCGTACATCTGACCCAGAGAAGGCTCGTGGGGTTCTCAAGTGTGACATCTCAGACCTGTCACTCATCTGTTCGCTGGGCTACAGCATCCTTTTGATGGTAACATGCACTGTTTATGCCATCAAGACCCGCGGCGTGCCAGAGACCTTCAACGAGGCCAAGCCAATTGGATTTACTATGTACACTACCTGCATCATTTGGTTAGCTTTTATACCTATCTTCTTTGGCACCGCACAATCGGCAGAAAGGATGTACATCCAGACGACCACCCTCACCATCTCCCTCAGCCTCAGCGCCTCTGTGTCTCTGGGGATGCTCTACATGCCCAAAGTCTACATCATCATCTTCCACCCGGAGCAGAACGTGCCCAAACGCAAGCGCAGCTTCAAAGCCATCGTCACCGCCGCCACCATGTCAGGAAAACTGGTACAGAAGGGAAGCGACCGGCCTAACGGGGAAGTGAAGACCGAGCTTTGTGAGAGCATGGAGACCAACACATCTTCTACCAAGACGACATATGTCAGCTACAGCAATCACGCCATCTGAAGAGGGACACTCTCTGTGGGCGGAGCCGAGGGCGGGGCCCTGTCTGAAGCAGGACGTCTGTCATGTGACACGTGCTGACAGGCAAATGGACCTGGAACGGGCATCCGAGCATGAGATTTTTATATCGTTCTGCATCAATCTAAAACCTGCGGCATCCTGGGAGACAAACAGACTTATGGGAGCTTCCAGCGAGACTGCCATCCTGCGTTCAAGAGCTACCGATCCTGCCATGAACACACgtgaacacgcacacactcactaaaCTGAAGGTGAAGGCTTGCAGTCATACAAAAAATAACTTTCCACAAATAATCGTGTAAACATTCTGCAGATGGAGACGTTCACGGTAAACTTCGGAAATgtggatgtaaaaaaaaaaaaagaaaaaaaaaaagaagaaaatatatgaaaactacCAGAGTCAAACTatgtttgttgttattgtatttttgtggtCGTGCAGATTTTTTCATTCTTGTCCCACTTTGTCAGAAACCTGCATTCTGAGATGACGTGTCTTGTATTGGCTGACTGAATCGTAACCGCGGGGTTGTGAAGCTGTAAAATGCCATGGTTGAAGCATGCTAGTTTTTAtaccaaaaaaagaagatttatttataataaaggaATGTTTTGCAAATGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36909 lncRNA upstream 87926 864840 ~ 933111 (+) True G24811
TU36856 lncRNA upstream 369444 649509 ~ 651593 (+) True G24768
TU36846 lncRNA upstream 395812 623251 ~ 625225 (+) True G24758
TU36839 lncRNA upstream 401341 619477 ~ 619696 (+) True G24754
TU36836 lncRNA upstream 405181 615600 ~ 615856 (+) True G24751
XR_006250559.1 lncRNA downstream 1376 1112895 ~ 1127380 (+) True LOC122342413
TU37037 lncRNA downstream 135861 1247380 ~ 1249169 (+) False LOC122342481
TU37074 lncRNA downstream 175093 1286612 ~ 1287073 (+) True G24925
TU37102 lncRNA downstream 217946 1329465 ~ 1331843 (+) True LOC122342419
TU37142 lncRNA downstream 444873 1556392 ~ 1557778 (+) True G24968
XM_043237157.1 mRNA upstream 51678 958334 ~ 969359 (+) True znf800b
XM_043237158.1 mRNA upstream 51678 958357 ~ 969359 (+) False znf800b
XM_043236945.1 mRNA upstream 63687 939160 ~ 957350 (+) True atxn7l1
XM_043236944.1 mRNA upstream 63687 939160 ~ 957350 (+) False atxn7l1
XM_043236948.1 mRNA upstream 83214 934046 ~ 937823 (+) True sypl1
XM_043236306.1 mRNA downstream 134059 1245578 ~ 1248290 (+) True LOC122342481
XM_043237710.1 mRNA downstream 146214 1257733 ~ 1272088 (+) False waslb
XM_043237708.1 mRNA downstream 146215 1257734 ~ 1272088 (+) True waslb
XM_043237711.1 mRNA downstream 148878 1260397 ~ 1272088 (+) False waslb
XM_043236823.1 mRNA downstream 176778 1288297 ~ 1289481 (+) False ndufa5
TU36860 other upstream 355507 654092 ~ 665530 (+) True G24771
TU36683 other upstream 646955 373527 ~ 374082 (+) True G24632
TU36680 other upstream 647213 373527 ~ 373824 (+) False G24632
TU36656 other upstream 725968 293235 ~ 295069 (+) True G24609
TU36577 other upstream 936075 83688 ~ 84962 (+) True G24555
TU37077 other downstream 176793 1288312 ~ 1291224 (+) True ndufa5
TU37269 other downstream 558993 1670512 ~ 1672959 (+) True LOC122343488
TU37230 other downstream 672773 1784292 ~ 1788096 (+) True LOC122342451
TU37871 other downstream 2003989 3115508 ~ 3117988 (+) True ninj2
XR_006250571.1 other downstream 2008010 3119529 ~ 3306758 (+) False erc1b

Expression Profile