RNA id: XM_043237393.1



Basic Information


Item Value
RNA id XM_043237393.1
length 1289
RNA type mRNA
GC content 0.47
exon number 3
gene id LOC122343076
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22235757 ~ 22239007 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CATAAGACCGCGCCGCGCTCCTGCGTCTGCGGCTCAGCTGGAGAAAGGACAAAGTGTTCAAACACGGAAAAACCTGACTGACGCGCGGTTGTAAAGATGGagcgtataaaaaaaaagagtgaagaaGTGAAGAGTAAAGAAACATTCAGACATGAAGAAgctgaggaacaaacagACCCGATGGCACTGAAAGAGAAGAGTGAAGAACTCAATGAAGCGGATGAGAAAGATCGTGATTTCATGAATGGGGAAAAATCCTTTAACTGTTCACAGACAGAAAAGACTTCAAGAAAAATGGCTCAAACGACGGGAGGAAGTTATATCGCCTGCCAACCGTTTGAAAAGGGTTTCAGTCAAACAGAAAGCATTAACAGGTCTGTGAGTATCCACACAGGAGAGAAACTATACGCGTGTCAACAGTGTGGAAGGAGTTTCACTCAACATCGACACCTTGAAGtccacatgagagttcacaccggagagaagccctttGCCTGCCAGCAGTGTGGAAAGCATTTCAGTCATAGAGTAAGTCTTAAAAGACACATgaggattcacaccggagagaagccgtacaCCTGTCAGCAGTGTGGGAGGAGTTTCACTCAGTCTGGACAGCTCGGGCTTCACATGAgcgttcacaccggagagaagccctacAAGTGCCCGCAGTGCGGAAGGAGTTTCAACCGAAAAGGAAACCTTCACTGCCACATGAAAATTCACACCGGAGAGCAGCCGTACACATACGATCAGTGTGAGAAGAGTTTTGATCAACAGGACGTCCTCGACGTCCACATGAGAACTCGTCGAGAGAAGCCCTACATCTGTCCTCAGTGTGGAAAGTGGTTTAATCATAAAGGACGCTTTGAGGACCACATAAGaactcacaccggagagaagcctttcaccTGCCAGCAGTGTGGGAAATGCTTCAGCCAAAAAGGAAACCTCGACAGgcacatgagagttcacaccggagagaagccctgTATATGTGGTCACTGCGGAAAGAGATTCAGATATAGAGCAGGACTTAAGTACCACATGAGGTTTCACATTTGAGAGCTTGGGTTACGCCTTTTCAGGCCCTGAAAACCATCCTAGCTGATTTTATGCTGCCAATGTAACATGGGTCATGTAATAACACCAGAGAGAAGCCTTTGCTCTGTGGAAAGACTTGCAGAAACCAGACAATCTTGAGCTTAACAGAAGCACCCCTGATATAATTCAATGCAGCCAAGCGGTGCATTTGGGCGTGTTGTCCCGCACTGGTCTCAAACTTGATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU45059 lncRNA downstream 426139 21676876 ~ 21809618 (-) True G30423
TU45070 lncRNA downstream 463557 21769579 ~ 21772200 (-) False LOC122342302
TU45062 lncRNA downstream 559626 21673723 ~ 21676131 (-) True G30425
XR_006250701.1 lncRNA downstream 562333 21668810 ~ 21673424 (-) False LOC122343179
XR_006250700.1 lncRNA downstream 562333 21668810 ~ 21673424 (-) True LOC122343179
TU45132 lncRNA upstream 41665 22280672 ~ 22281189 (-) True G30465
TU45173 lncRNA upstream 120210 22359217 ~ 22421953 (-) True G30499
XR_006250717.1 lncRNA upstream 157511 22396518 ~ 22398023 (-) True LOC122343195
TU45181 lncRNA upstream 186585 22425592 ~ 22428757 (-) True G30506
TU45193 lncRNA upstream 247768 22486775 ~ 22487119 (-) True G30518
XM_043237439.1 mRNA downstream 356965 21870416 ~ 21878792 (-) True LOC122343106
XM_043237440.1 mRNA downstream 356985 21870415 ~ 21878772 (-) False LOC122343106
XM_043236101.1 mRNA downstream 375473 21847120 ~ 21860284 (-) True LOC122342306
XM_043236099.1 mRNA downstream 455138 21775098 ~ 21780619 (-) True LOC122342303
XM_043236098.1 mRNA downstream 463358 21769124 ~ 21772399 (-) True LOC122342302
XM_043237479.1 mRNA upstream 76901 22315908 ~ 22320097 (-) True LOC122343126
XM_043237170.1 mRNA upstream 86503 22325510 ~ 22334793 (-) True LOC122342947
XM_043237171.1 mRNA upstream 146856 22385863 ~ 22395600 (-) True LOC122342948
XM_043237275.1 mRNA upstream 190067 22429074 ~ 22431623 (-) True LOC122343006
XM_043237366.1 mRNA upstream 256279 22495286 ~ 22499529 (-) True LOC122343060
TU45123 other downstream 19287 22216035 ~ 22216470 (-) True G30457
TU45011 other downstream 458951 21629617 ~ 21776806 (-) True G30396
TU44977 other downstream 495427 21737091 ~ 21740330 (-) True G30372
TU45006 other downstream 849320 21383469 ~ 21386437 (-) True G30395
TU45009 other downstream 849779 21383469 ~ 21385978 (-) False G30395
TU45768 other upstream 1195973 23434980 ~ 23437015 (-) False LOC122342328
TU45855 other upstream 1258122 23497129 ~ 23546369 (-) False G31017
TU45890 other upstream 1506479 23745486 ~ 23771768 (-) True G31050
TU45934 other upstream 1871217 24110224 ~ 24110673 (-) True G31091
TU46017 other upstream 2065089 24304096 ~ 24497596 (-) True G31134

Expression Profile