Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043237406.1 |
| length | 996 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 9 |
| gene id | exosc2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 17933305 ~ 17937916 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0090305 | nucleic acid phosphodiester bond hydrolysis | biological_process |
| GO:0000178 | exosome (RNase complex) | cellular_component |
| GO:0004527 | exonuclease activity | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K03679 | RRP4, EXOSC2; exosome complex component RRP4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU43518 | lncRNA | upstream | 901 | 17931884 ~ 17932404 (+) | True | G29364 |
| TU43430 | lncRNA | upstream | 10416 | 17920709 ~ 17922889 (+) | False | G29318 |
| TU43427 | lncRNA | upstream | 13695 | 17916054 ~ 17919610 (+) | True | G29318 |
| TU43454 | lncRNA | upstream | 77941 | 17854461 ~ 17855364 (+) | True | G29329 |
| TU43463 | lncRNA | upstream | 109040 | 17823898 ~ 17824265 (+) | False | G29334 |
| TU43659 | lncRNA | downstream | 61681 | 17999597 ~ 18002479 (+) | True | G29476 |
| TU43661 | lncRNA | downstream | 61681 | 17999597 ~ 18001240 (+) | False | G29476 |
| TU43674 | lncRNA | downstream | 121419 | 18059335 ~ 18060916 (+) | True | G29484 |
| TU43755 | lncRNA | downstream | 497727 | 18435643 ~ 18460595 (+) | True | G29544 |
| TU43761 | lncRNA | downstream | 503715 | 18441631 ~ 18465837 (+) | True | G29548 |
| XM_043237498.1 | mRNA | upstream | 17711 | 17912439 ~ 17915594 (+) | True | fabp1a |
| XM_043237496.1 | mRNA | upstream | 17870 | 17912441 ~ 17915435 (+) | False | fabp1a |
| XM_043237497.1 | mRNA | upstream | 17870 | 17912441 ~ 17915435 (+) | False | fabp1a |
| XM_043237493.1 | mRNA | upstream | 30388 | 17901441 ~ 17902917 (+) | True | oxt |
| XM_043237278.1 | mRNA | upstream | 121842 | 17805840 ~ 17811463 (+) | True | LOC122343009 |
| XM_043237201.1 | mRNA | downstream | 1768 | 17939684 ~ 17963519 (+) | True | abl1 |
| XM_043237202.1 | mRNA | downstream | 9922 | 17947838 ~ 17963519 (+) | False | abl1 |
| XM_043237237.1 | mRNA | downstream | 47077 | 17984993 ~ 17997658 (+) | True | ddx54 |
| XM_043237386.1 | mRNA | downstream | 264819 | 18202735 ~ 18210893 (+) | True | lman2la |
| XM_043237485.1 | mRNA | downstream | 280800 | 18218716 ~ 18222320 (+) | True | LOC122343129 |
| TU42966 | other | upstream | 1458924 | 16473898 ~ 16474381 (+) | True | G28982 |
| TU42861 | other | upstream | 1947579 | 15985219 ~ 15985726 (+) | True | G28899 |
| TU42853 | other | upstream | 2091450 | 15841372 ~ 15841855 (+) | True | G28891 |
| TU42722 | other | upstream | 2278124 | 15650295 ~ 15655181 (+) | True | cdkn1d |
| TU42701 | other | upstream | 2377623 | 15439334 ~ 15555682 (+) | True | G28806 |
| TU43729 | other | downstream | 362499 | 18300415 ~ 18301189 (+) | True | G29526 |
| TU43756 | other | downstream | 498544 | 18436460 ~ 18461317 (+) | True | G29545 |
| TU43926 | other | downstream | 945263 | 18883179 ~ 18886402 (+) | True | G29642 |
| TU44195 | other | downstream | 1352304 | 19290220 ~ 19342911 (+) | True | G29814 |
| TU44225 | other | downstream | 1793346 | 19731262 ~ 19786128 (+) | False | G29835 |
