RNA id: XM_043237444.1



Basic Information


Item Value
RNA id XM_043237444.1
length 1236
RNA type mRNA
GC content 0.58
exon number 3
gene id LOC122343108
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24485362 ~ 24492499 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGCCGGTCCAGGTGGAGGAGGAAGGCGTGAGCTGCAGAGAGCCGAGCGGAGCCGAGCGGAGCATGGGCCCCTGATCCACGCACTCATGGAGCCCGAGGACCCTCAGGACCCCGACTCCTTCGACTTCCTCTTCAAGATCATCCTCATCGGAGACTCCAACGTGGGCAAGACCTGCCTGGTGCAGAGCTTCAAGAGCGGCCTGTTCTCCGAGGCGCAGCAGAACACCATCGGAGTGGACTTCACCGTGCGCACGCTGTCCATCGACGGCCGCAGGGtcaagatgcaGGTGTGGGACACGGCGGGGCAGGAGCGTTTCCGCACCATCACTCAGAGCTACTACCGCAGCGCTCACGGGGCCCTGATCACCTATGACATCAGCCGGAGGGACAGCTTCGACTCGGTGCGCCGCTGGACCCACGAGCTCCGGCGCTTCGGGGCCGCCAACGTGCTGACCGCCCTCATAGggaaCAAGCGTGACCTGGAGGCGGAGCGTGAGGTGCTGTTCTCAGACGCCTGTAAGCTAGCGGAGGAGCAGGGCATGCTAGCGGCTCTGGAGACGTCTGCCCGTGAGCGGCGGAGCGTGGAGGAGGCCTTCGTCCTGATGGCGCGGCAGCTGCTGCAGAGGAACGACCCGAGGGTGTCTCCGGACGCCGGCCCCCGCCCGCCGCTCCGCCCCGACTCACGCCCCGTCCTCAGCGCGCCGCCGCTAGCCGACAGAGAGCGAGCGCAGCCCTGCCGGTGCTGACCGCAGCGGGGCCCGGGGCCGGAGGGGCCACGTTTACCGAAGCAGGTCGGCATGGCAACTATTTATTGGACGCGTGATCTTCTACGAGTTCTGCGTTTCTCGTGAATCAATGAAGACGACGAGAAACATGTGAAGGTGTGTAAAGGTGCAGCACAAGAAAGACGTCTAGAGGAGCGTTAGATGATCATCAGAGAACAGAGGGATGTTAGCTCGGCTGATTTAAAGAGCGGCTTAGAGTTACTCTGAGGAACgtgttaaatatttgaattataagATCAATGTTTAGATGGTTTTAGAGGTTTTCAGGAAGTGctgcttttcttctctttgatCCTGGATGTTAGCCTTCGCTCAGAAGCTGTTATCctctttgtattattttactttaatgaaaAGAAGTCGTGATGTGTTTAAGCTCAAGCTTTGAAGGGCTGTGTATCAGAAACAAAGtgattgttttcttcttctgcaataaaatgatttgacGGCTC

Function


GO: NA

KEGG:

id description
K17047 RAB19; Ras-related protein Rab-19

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46045 lncRNA downstream 18806 24465363 ~ 24466556 (-) True G31155
TU46046 lncRNA downstream 18806 24465363 ~ 24466556 (-) False G31155
TU46005 lncRNA downstream 20468 24453461 ~ 24464894 (-) True G31124
TU45999 lncRNA downstream 27103 24457414 ~ 24458259 (-) True G31121
XR_006250677.1 lncRNA downstream 37072 24445529 ~ 24448290 (-) True LOC122343161
TU45967 lncRNA upstream 8353 24500852 ~ 24502175 (-) True G31115
TU46052 lncRNA upstream 21457 24513956 ~ 24552855 (-) True G31161
TU46065 lncRNA upstream 60919 24553418 ~ 24683082 (-) True G31165
TU46063 lncRNA upstream 60949 24553448 ~ 24683082 (-) False G31165
TU46084 lncRNA upstream 143762 24636261 ~ 24639737 (-) True G31179
XM_043237349.1 mRNA downstream 5448 24476996 ~ 24479914 (-) True ckap4
XM_043236128.1 mRNA downstream 158099 24325388 ~ 24327263 (-) True LOC122342340
XM_043236125.1 mRNA downstream 166250 24312842 ~ 24319112 (-) True LOC122342338
XM_043237510.1 mRNA downstream 218755 24265349 ~ 24266607 (-) True LOC122343156
XM_043237254.1 mRNA downstream 265354 24207655 ~ 24220008 (-) True LOC122342994
XM_043236131.1 mRNA upstream 49639 24542138 ~ 24544170 (-) True LOC122342346
XM_043237262.1 mRNA upstream 65633 24558132 ~ 24564000 (-) True LOC122342998
XM_043237239.1 mRNA upstream 90468 24582967 ~ 24593953 (-) True LOC122342983
XM_043237376.1 mRNA upstream 134565 24627064 ~ 24631306 (-) False LOC122343065
XM_043237383.1 mRNA upstream 134565 24627064 ~ 24630716 (-) False LOC122343065
TU46025 other downstream 158130 24323970 ~ 24327232 (-) False LOC122342340
TU46026 other downstream 158130 24325784 ~ 24327232 (-) False LOC122342340
TU46027 other downstream 158130 24326795 ~ 24327232 (-) False LOC122342340
TU45934 other downstream 374689 24110224 ~ 24110673 (-) True G31091
TU45890 other downstream 713594 23745486 ~ 23771768 (-) True G31050
TU46123 other upstream 266501 24759000 ~ 24760786 (-) False LOC122342407
XR_006250852.1 other upstream 859490 25351989 ~ 25352153 (-) True LOC122343864
XR_006250869.1 other upstream 859900 25352399 ~ 25352587 (-) True LOC122343882
XR_006250841.1 other upstream 861422 25353921 ~ 25354084 (-) True LOC122343852
XR_006250860.1 other upstream 861838 25354337 ~ 25354527 (-) True LOC122343873

Expression Profile