RNA id: XM_043237498.1


Basic Information

Item Value
RNA id XM_043237498.1
length 1563
RNA type mRNA
GC content 0.38
exon number 4
gene id fabp1a
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17912439 ~ 17915594 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aaatctaaatatatttaatgtaaacacaatTTTAACATCTTCAAAAAGAAGTGAAATTTTATCCAAATactattttgtcatatttaatattcttccttgatatttttatatatttgtgaatCGACTAACGATGAACTCAGTCACGTGGGGCTAAACATTATTTGGcctaaacaatatttattctatttttaattcacCCTATGTATCCACAAATGAATCGTTGTTAAATTCTTCGGTGctggtttttgttgtttgtgaaTTACATgcttgtgaaaatgtttttttttttcctgtcacgTGATAACCGTTACTTTACCCAGCGCTGTAAGGATAAGCCAATCAAAGCTGTTTGTGATTACTGAAGACGATTACACGTTGCTTGGATGAAATAGAAAACTGTAAACACGAACGTAACACAACCTTAAAAGTCAAACcctattaaaactaaaaagtataaaagtgTCTAATCACTTAaagattgtaattaataatgttttattaataatgctttATGTTTGAAACGGAATTTATGCTTAGACTTAAAAGAGTTGATACTGTAAGATTATATGGGGCTATTTGTCACAATATATGGACTCTGGAATCAAATAGCCatcaacagtaaaaaaaaaaagaaaaaaagaagtgtgataTTAGTGTCAGTTTAAGACGATTCTGTTGGTTTTGAGGTTTTAgctcttgtgttttatttgttaaatgttcTTGTCCGAACCAACATGAGAAGAGACTGTTATCATCTTTCTCTTGTAAAGCGTTTAAAAGATCCTGTGATTAAAAAGTGATGAAGTTCTCCTGAAACATGTGAAGATCAGCTGACAGAAATGTCTCGTTTCAGCAGACCTTTGGACATTTATTCCAAACTAAGCTTTTTCTCGGTGGATTATTCATAATCTTTCTTTATATAATCGTATTGTGCATTGATAGGTTTAAAGCCTGATGAAACAGACCCCGATTGAGAGCAAACACAGTCGAAGAGTCTTCTGGACCGGATCTGAAGAAACCCACGGTGAGATCGAGTCCGTCTTCTGACTTTAACGATCGCTGTGTGGCTGAATGCTGAAGTGTTTCTGCAGCTGCTGATGGATTTCAGTGGAAAATACCAGCTGGAGTCACACGAGAACTTCGAGGCCTTCATGAAGGCCATCgGGCTGCCGGATGAAGAGATCGAGAAAGGCAAAGACATCAAGAGCATCTCAGAGATCCATCAGGACGGGAAGGACTTTAAAGTGACGGTGACGGCCGGGACCAAAGTGGTGCTGTACTCGTTTACCGTAGGAGAAGAGTGTGAGCTGGAGACCTTCACCGGAGAGAAAGCTAAAagcgTGGTTCACATGGATGGGAATAAGCTGACGGTGTGTGTGAAGGGGATCGAGTCTGTGACGGAGCTGACCGGAGACACCATCATTAACATCCTCAGCTTCGAGGGAATCGTCTACAAACGTCTCAGCAGACGCATCTGATCAGGATCATTCACTCACAACAGCACACAGGATCTGCTCAGAGCAtctttattacacacacacacacacacacacacacacacac

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0005504 fatty acid binding molecular_function
GO:0005215 transporter activity molecular_function

KEGG:

id description
K08750 FABP1, L-FABP; fatty acid-binding protein 1, liver

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU43454 lncRNA upstream 57075 17854461 ~ 17855364 (+) True G29329
TU43463 lncRNA upstream 88174 17823898 ~ 17824265 (+) False G29334
TU43465 lncRNA upstream 88668 17823393 ~ 17823771 (+) False G29334
TU43464 lncRNA upstream 88699 17823250 ~ 17823740 (+) True G29334
TU43427 lncRNA downstream 460 17916054 ~ 17919610 (+) True G29318
TU43430 lncRNA downstream 5115 17920709 ~ 17922889 (+) False G29318
TU43518 lncRNA downstream 16290 17931884 ~ 17932404 (+) True G29364
TU43659 lncRNA downstream 84003 17999597 ~ 18002479 (+) True G29476
TU43661 lncRNA downstream 84003 17999597 ~ 18001240 (+) False G29476
XM_043237493.1 mRNA upstream 9522 17901441 ~ 17902917 (+) True oxt
XM_043237278.1 mRNA upstream 100976 17805840 ~ 17811463 (+) True LOC122343009
XM_043236807.1 mRNA upstream 246542 17644435 ~ 17665897 (+) True kdr
XM_043236808.1 mRNA upstream 281617 17582070 ~ 17630822 (+) True clocka
XM_043237406.1 mRNA downstream 17711 17933305 ~ 17937916 (+) True exosc2
XM_043237407.1 mRNA downstream 17774 17933368 ~ 17937916 (+) False exosc2
XM_043237201.1 mRNA downstream 24090 17939684 ~ 17963519 (+) True abl1
XM_043237202.1 mRNA downstream 32244 17947838 ~ 17963519 (+) False abl1
XM_043237237.1 mRNA downstream 69399 17984993 ~ 17997658 (+) True ddx54
TU42966 other upstream 1438058 16473898 ~ 16474381 (+) True G28982
TU42861 other upstream 1926713 15985219 ~ 15985726 (+) True G28899
TU42853 other upstream 2070584 15841372 ~ 15841855 (+) True G28891
TU42722 other upstream 2257258 15650295 ~ 15655181 (+) True cdkn1d
TU42701 other upstream 2356757 15439334 ~ 15555682 (+) True G28806
TU43729 other downstream 384821 18300415 ~ 18301189 (+) True G29526
TU43756 other downstream 520866 18436460 ~ 18461317 (+) True G29545
TU43926 other downstream 967585 18883179 ~ 18886402 (+) True G29642
TU44195 other downstream 1374626 19290220 ~ 19342911 (+) True G29814
TU44225 other downstream 1815668 19731262 ~ 19786128 (+) False G29835

Expression Profile