RNA id: XM_043237502.1


Basic Information

Item Value
RNA id XM_043237502.1
length 348
RNA type mRNA
GC content 0.41
exon number 3
gene id LOC122343144
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 21741323 ~ 21742305 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAGGACGATGGCGTCCGTTAAAGAGCTGCTTGTGGACTTACTGAAGGATCTGAAAGAAGCTGAACCAAAGGAGTTTCATTGGTGGTTAAAGAATGGACATCATAAGCCTATATCAAAGTCTGAAATGGAGAAGGCAGATGTATTAGACACAGTAGATAAGATGGTTATGTGTTTTGGACCAGAAGACGCTGTGAAGGTCACGGTAGACATCCTGAGAAAGATGAACCAAAATGATCTGGCTAAACAGTTGCAGAATGAACACAACTCAGACTGAGGACAATATGAAGACATCTGTCCCTGTTAGAGagctccaaaatgtcttgaaaactcacaaaaaaacaacatgaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU44614 lncRNA upstream 19413 21333245 ~ 21721910 (+) True G30104
TU44664 lncRNA upstream 214312 21485712 ~ 21527011 (+) True G30133
TU44661 lncRNA upstream 219070 21479557 ~ 21522253 (+) True G30132
TU44668 lncRNA upstream 241809 21498864 ~ 21499514 (+) True G30136
TU44666 lncRNA upstream 242942 21496823 ~ 21498381 (+) True G30134
TU44657 lncRNA downstream 6705 21749010 ~ 21811284 (+) True G30130
TU44748 lncRNA downstream 399039 22141344 ~ 22255433 (+) True G30205
TU44753 lncRNA downstream 420333 22162638 ~ 22240294 (+) True G30206
TU44760 lncRNA downstream 432650 22174955 ~ 22252519 (+) True G30212
TU44775 lncRNA downstream 508130 22250435 ~ 22251792 (+) True G30226
XM_043237208.1 mRNA upstream 50791 21673720 ~ 21690532 (+) True LOC122342967
XM_043237301.1 mRNA upstream 91145 21644319 ~ 21650178 (+) False LOC122343024
XM_043237300.1 mRNA upstream 91145 21644545 ~ 21650178 (+) True LOC122343024
XM_043237315.1 mRNA upstream 288461 21449517 ~ 21452862 (+) True LOC122343031
XM_043236091.1 mRNA upstream 291813 21447240 ~ 21449510 (+) True LOC122342295
XM_043236096.1 mRNA downstream 1330 21743635 ~ 21761181 (+) True LOC122342301
XM_043237329.1 mRNA downstream 66851 21809156 ~ 21814437 (+) True LOC122343035
XM_043236100.1 mRNA downstream 98876 21841181 ~ 21842230 (+) True LOC122342305
XM_043237385.1 mRNA downstream 361013 22103318 ~ 22104932 (+) True LOC122343067
XM_043237344.1 mRNA downstream 362931 22105236 ~ 22107457 (+) True LOC122343041
TU44630 other upstream 99567 21639540 ~ 21641756 (+) True G30115
TU44637 other upstream 111203 21388193 ~ 21630120 (+) True G30119
TU44553 other upstream 570728 21169249 ~ 21170595 (+) False LOC122342286
TU44534 other upstream 598492 21118562 ~ 21142831 (+) True G30058
TU44410 other upstream 1034477 20696672 ~ 20706846 (+) True G29961
TU44767 other downstream 489165 22231470 ~ 22231924 (+) True G30218
TU44785 other downstream 554592 22296897 ~ 22301519 (+) False LOC122342310
XR_006250667.1 other downstream 919521 22661826 ~ 22682712 (+) False LOC122343019
TU45293 other downstream 1035737 22778042 ~ 22779597 (+) False LOC122342317
TU45355 other downstream 1386801 23129106 ~ 23130189 (+) True G30636

Expression Profile