RNA id: XM_043237568.1


Basic Information

Item Value
RNA id XM_043237568.1
length 1619
RNA type mRNA
GC content 0.43
exon number 10
gene id rad51ap1
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1680949 ~ 1683573 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttatcagttACCTAGTGTAAAACTGCAGTCACAACGATAGAAAAGATTGTATTGAATTGCAAATAAGTGTATTCAGATAGATTTCCGTCGTTTGTTTTCAGGCGGGTGGCGCGAGTGTATATGGACTCGCACCAAAAtcacatgcatttaaaacttaTGACACAACCACAGACTTTCTAATTGGTATTATGCTTTTAAACTTACTGGTAATTTGATTGTTGGTTGTTGTGCAGTATAACGTTGAGCAGCTTCAAAACGTTGTTAAATTACAGCGGTGGTGTCTGAATGTATATTCACGGGTCATAACTTGACATATTAGTTTAACTTTTTTGATTTGAAGAATGGATCGACCAACCAGAAATAAGAAAACTGTCAACTACACAGACTTCCAAGACGACGATGATGAGGATTTTGCCTGTGTAAAACCTCCTCCCAAAAAAGCTCGAACGGCCATAAAAGACCAGGATTCTGAGAGCCACCGCAAAACTGCAAGTGCCTCTCCAAATGATGTTGTTGATCTTACCAGCTCAGGACACAAGAAGAGGGCGTCTCTGGAGGATACATTTTGTGACAGAGATTTAGAGACAGCTCTATCTTTATCGTTGCTGGACTCTTTAAGAACACAGGATGGAGATCCTGCAACCAAAACAGATGAATATGACAGTTCTCAGCCTCCTCAGTGTTCACCACCTGTTTTAATACACTGCAGCTCCGAGGGCAGCCATTTagTCTGTGATGGTCAGCCTCGTCCAAATTCTCCTCCTGTGCTGTCCAATTGTAGCATTGATGGCAGTAGTTTAGGGCTGAATCTGATCAGTGTAGATGCCTCCCCTACCAGTATTTCTAAGCAGAAGGACACTTCAGAGGAGCAGAGAAAACCACCAAAGGAGAAGAAGGACAACCAAGACGATGAGGACTACCAGCCTCAGAACACACCAGATTCAGAAAGTGATGCAGACTTTACTGAAGAAGATGAGAGCGAAGACGAGACGTTCACTACAAAAAAGAAGGTTGTGAaacagaagacagaaaaaaagaaaccaccAGCTGCAAAGAACAAGgcagaaaagaaagacaaaaagccAACGAAATCTTCAAAAGCCAAAGGCtcagCTCCCAACTCCGTTCTCTGCCGGAGTCCTGCCGCTCCGGTGTGTGGAGCGAAGAAGACACCTACTTCTCCGCTTCTCTCTAAACCTGCAGTGTGCTCCAGTCCTTCAGGGGCCAGGCTGCCTAAGTGGAATCCCCCTGGTCTGCTTGGCCGCAGCCCCGGTGCATCTCAGAATGCACACGTGAAGTCTCCAGGACAGGGGCTGCGTTTAGGACTTTCTCGTATGGCTCGAGTCAAACCTCTTCACCCCAATGCTGCAATCTAAATGGActtgttttaaattttgtaGCCTTACAAATGGCTTTTGGGAACTCATAGTGCATGGGACAGGAAAAAACATGGTAAGAAGGAATGgatattttttactgaaatatttccAGAATTTAAGACGTCCCTCTTTTATCCCAGTAATATGTAACAACcgtttttgttgtgcttttaatatttgtttatgtcCTTTCATAGTGTGTTTTAGCTTTGTAAATATGCactttttgataaataaaga

Function

GO:      GO:0043566

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37351 lncRNA downstream 14812 1665838 ~ 1666137 (-) True G25127
TU37350 lncRNA downstream 17049 1663073 ~ 1663900 (-) True G25126
TU37349 lncRNA downstream 18342 1662345 ~ 1662607 (-) True G25125
TU37348 lncRNA downstream 19561 1660605 ~ 1661388 (-) True G25124
TU37323 lncRNA downstream 85661 1594720 ~ 1595288 (-) False selenoo2
TU37364 lncRNA upstream 4785 1688358 ~ 1688894 (-) True G25133
TU37365 lncRNA upstream 5435 1689008 ~ 1692325 (-) True G25134
TU37370 lncRNA upstream 32338 1715911 ~ 1716264 (-) True G25137
TU37397 lncRNA upstream 65805 1749378 ~ 1752092 (-) True G25152
TU37399 lncRNA upstream 68786 1752359 ~ 1753641 (-) True G25153
XM_043237974.1 mRNA downstream 2337 1675202 ~ 1678612 (-) True LOC122343487
XM_043237973.1 mRNA downstream 10803 1666645 ~ 1670146 (-) True LOC122343486
XM_043236298.1 mRNA downstream 22684 1655036 ~ 1658265 (-) True si:ch211-214j24.14
XM_043236299.1 mRNA downstream 23352 1655036 ~ 1657597 (-) False si:ch211-214j24.14
XM_043236318.1 mRNA downstream 26123 1653598 ~ 1654826 (-) True ccdc167
XM_043237838.1 mRNA upstream 1556 1685129 ~ 1687279 (-) True fgf23
XM_043237589.1 mRNA upstream 9978 1693551 ~ 1697391 (-) True fgf6b
XM_043236188.1 mRNA upstream 21876 1705449 ~ 1708797 (-) False tigarb
XM_043236187.1 mRNA upstream 21876 1705449 ~ 1708795 (-) True tigarb
XM_043236622.1 mRNA upstream 167670 1851243 ~ 1862194 (-) False vegfab
TU37319 other downstream 26142 1653591 ~ 1654807 (-) False ccdc167
XR_006250650.1 other downstream 62651 1609360 ~ 1618298 (-) False zgc:113263
XR_006250649.1 other downstream 62651 1609360 ~ 1618298 (-) False zgc:113263
TU37001 other downstream 610853 1069160 ~ 1070096 (-) True G24875
TU36940 other downstream 747841 908946 ~ 933108 (-) False pik3cg
TU37444 other upstream 218270 1901843 ~ 1902567 (-) False rsph9
XR_006250653.1 other upstream 359380 2042953 ~ 2088579 (-) True cald1a
XR_006250644.1 other upstream 618754 2302327 ~ 2375716 (-) False dock4b
XR_006250645.1 other upstream 620773 2304346 ~ 2375716 (-) False dock4b
TU38086 other upstream 1337489 3021062 ~ 3021457 (-) False LOC122342805

Expression Profile