RNA id: XM_043237571.1


Basic Information

Item Value
RNA id XM_043237571.1
length 2778
RNA type mRNA
GC content 0.45
exon number 19
gene id gramd4a
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 14074263 ~ 14115308 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtgtgtgagagtgtgtgtgtgagttcgGTGACATCAACAAGACACGCAGATCCGTGTTCTCTGGAGGGATTGACATTAACTCACACACAATCAAGACTCCGGGGACACCGCGCAGCTCTTATAGGCAGCGGAGGGGAAGAGAGCGCGCTCCCGCTCAGGGATCTGGTGTATATTTACAGCGGGTTTTCCAGCAGGTGTTACTGAAGGATCTATCACCGACCATCAGCGGGGTTCATGAAACTTTGCTACGATTTGCGAGCCGGGGCTGCCATACACAATGTTAAGGTAAAGCCTAAAGCAGCTGTGTTGAACATGCTGAAGCGGCTGGACAAAATAAGATTCCGTGGTCCAAAGCGAGATGACTTCCTGGATTTACCCGAGTCCCCCACGGGGTCCGACACCGAATGTAGTGACGACATGCTGCTGAGACCTCGACCTTCAATACGAGACAATGACGAACAAAGAGACCCTGCTGGTTTGGGGACTTTGTCTGTCATGCAAGACCTGAGGAGCGAATCGGAACGTCTCAATGAGGTCAAGGGTCATTTGGAAATTGCCTTATTGGAGAAACACTTCCTACaggagGAACTGCGGAAGCTACGAGAAGAAACCAATGTGGAGACCCTGAAGCAGGAGCTGGAGAGAGAACGCAGCAGAAGAGTCGACCTGGAACAGAAGATGAGTGACGTGCTGAAGACCAGGTGTGAAGATTCTCCGCCGCAGCCTCCACGCAAACAGCAGCCGCCTGCAGCTAACGGCACAGACAAGCAGCAGAAGGAGACGGTGTGTTCGCGGCTGCAGAGCTGGCTGTACGATCGCTTTGGGGTTTATATCGAGGATTTCCGCTTCCAGCCCGAGGAGAACACAGTTGAGGCCGAGGAGCCGTTAAGTGCTAAAAGATTAACAGAAAATATGCGACGACTTAAACGGGGTGCCAGACCAGTGACGAATTTCTTAAGGAACCTTTCCGCCTTATCCAACTGGCACTCGGTATATACATCAGCGATTGCCTTCATTATTTATATGAATGCAGCGTGGCATGGCTGGGCTATACCTTTGTTTCTGTTCTTAGCCATTCTGAGGTTGTCGTTGAACTACCTCATAGCCAGaggATGGAGAATTCAGTGGAGTATTGTGCCTGAAGTTTCTGAACCTGTggAACCTCCAAAGGAAGATCTAACGGTGTCTGAAAAGTTTCAATTAGTTCTTGATGTCGCACAAAAAGCACAGAATCTTTTTGGTAAGATGGCGGATGTTTTGGAGAAAATCAAAAATTTGTTCATGTGGGTTCAGCCCGAGATCACTCAGAAGTTGTACATCGCTCTGTGGGTGGCCTTCATCTCCTCTTGCGTCTTACCCTACAAGCTGATGGGCTTCATGATCGGGCTTTACGCGGGCATCAAGTTCTTCATTATAGACTTCCTGTTTAAGAGCTGCCCAAAACTCCGAGACAAATACGACACGCCGCACATCATGTGGAACAACCTGCCCACCGACCCTCAGCTGAAAGAACGCAGCAATGCCAATGTGTCACGACGGctgTCTGGGTGCGAGAAGatcCAGCCGGTGGTTTCACGAAGCAGTTTAGCCACCATCCCAGCAGGGGTGACCCGAGAAGAAGAGAGCGGACGTTCCCACAGCACAAAGAAAGGAGCGTTCCACGAGATCTTCAACCTGCCTGAGATCGAGAGACCTCTGCCCGTCTGCGAGAACGGATGGAGATGCTGCCTGATAAACAGAGACCGGAAGATGCCGACTGACTACATCCGCAACGGGATGCTCTACGTGACCGAGAACTACCTGTGTTTCGAGAGTTCCAGCTCGAGATCGGGGTCttcgaaaaaaaacaaagtcattaAACTGGTGGACATCACGGATATCCAGAAGACCTTTTGCTGCTTATCCTTCACTCGCTTGTTGGATATGAGCACTGTGGCAGTAGGTGGCAGCACCGCATCGCGGATTGAACACAGACCGACCTCCCATGGAAAGGACATTTCGATTCaatatacttacattttttgcagtttCTAAACTGTACgtttatgttttacattctGCATTCGGCagattctttttcattattattattcttcaataagaacaatttaataatgactttttttaccTTCATGGGGGTTCAAACTCATGGCTATTGCCATATCGCTACAGATATtattcatattgttttttttttttttaatgcaattataaatgctcatttttttaaaggtggaACACACTGATCGCCTTTTCTGcagttttgtttggttttttttgttcgcGGCAACTAAAATTCAGATCTTAAATGGActgttcaccaaaaaatgaaattatcaTCGACTCTCGTTTTGTTCGGTTTCTGTTTTCtcttgaacacaaaagaagaaaaaaaaaaactcaatgaCTCAATGTCAAACTCCAATCTGACAGCTGGTGGAAATTTCCATGATGGGGATCCAAATATACAACGAATTGCATTCATATGACACTTATTTTTCCATGTTATGGCGTTTTTGTTACCTATATCATGTTAAACATGTATCGAAAAAAGTGGTAAAACTTTAAGGCGTCCTTGTTACATgttaaatgtactgtaaaataatttatgcataattacgTACAAGTCACCCTTAACCTTCACCATAACCGTATAGTGAACTAATATTACCCAGTGcttaaatatgtaattacactgtaacgaggacaccttaaaataaaagcgTAATCAAAAAAGGTGCTTTTACAGTTATAATAACTCTTGGATTTCTGTTTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU42249 lncRNA upstream 81432 13992063 ~ 13992831 (+) False G28503
TU42246 lncRNA upstream 81463 13992023 ~ 13992800 (+) True G28503
TU42247 lncRNA upstream 81463 13992063 ~ 13992800 (+) False G28503
TU42214 lncRNA upstream 245726 13828025 ~ 13828537 (+) True G28486
TU42167 lncRNA upstream 314151 13757967 ~ 13760112 (+) True G28446
TU42486 lncRNA downstream 696910 14808597 ~ 14809661 (+) False G28667
TU42487 lncRNA downstream 696910 14808597 ~ 14809661 (+) True G28667
TU42569 lncRNA downstream 722943 14834630 ~ 14854751 (+) True G28726
XR_006250624.1 lncRNA downstream 751346 14863033 ~ 14864100 (+) True LOC122342648
TU42594 lncRNA downstream 1002424 15114111 ~ 15114528 (+) True G28745
XM_043237086.1 mRNA upstream 8582 13994131 ~ 14065681 (+) False celsr1a
XM_043237112.1 mRNA downstream 65743 14177430 ~ 14294618 (+) True tbc1d22a
XM_043237114.1 mRNA downstream 65744 14177431 ~ 14294618 (+) False tbc1d22a
XM_043237113.1 mRNA downstream 65744 14177431 ~ 14294618 (+) False tbc1d22a
XM_043236203.1 mRNA downstream 288437 14400124 ~ 14482461 (+) False tafa5a
XM_043236204.1 mRNA downstream 313294 14424981 ~ 14482461 (+) False tafa5a
XR_006250622.1 other upstream 82491 13985517 ~ 13991772 (+) False trmu
XR_006250621.1 other upstream 82491 13985517 ~ 13991772 (+) False trmu
XR_006250631.1 other upstream 121838 13882909 ~ 13952425 (+) False LOC122342701
XR_006250632.1 other upstream 135037 13882894 ~ 13939226 (+) False LOC122342701
XR_006250630.1 other upstream 640657 13405929 ~ 13433606 (+) False vezt
TU42431 other downstream 65777 14177464 ~ 14184260 (+) False tbc1d22a
TU42446 other downstream 288342 14400029 ~ 14482821 (+) True tafa5a
TU42445 other downstream 313244 14424931 ~ 14482821 (+) False tafa5a
TU42601 other downstream 1095464 15207151 ~ 15214432 (+) True LOC122343376
TU42701 other downstream 1327647 15439334 ~ 15555682 (+) True G28806

Expression Profile