RNA id: XM_043237684.1


Basic Information

Item Value
RNA id XM_043237684.1
length 2339
RNA type mRNA
GC content 0.51
exon number 12
gene id celf6
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 28421249 ~ 28537332 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCAGCTGACACGCGGCGAGAGAGACGCAGATGGAGAAAGTGAAAGAATCCTGAGGAGAAGAAACCCAGAGGAGCGACCAgcagagacagagggagaagaggaggaagaaagagagagagaggaggaggagtggATGGTAGAGAGCCGGAGACGCGGCGCGCCGGAGGGAGAAAGATGGCCTCGGTAACGGCGGAGAATGGCTTCAGCACCGCGAACAGCTCCGGTAGAATGAACGGACTCAACAGCGCGATTCCCATGAAAGATCACGACGCCATCAAGCTCTTCGTCGGCCAGATCCCGCGCAACCTGGAGGAGAAAGACCTCAAGCCTCTGTTCGAGGAGTTCGGGAAGATCTACGAGCTCACGGTGCTCAAGGACCGGTTCACCGGGATGCATAAAGgatgTGCCTTTCTAACGTACTGTGCCAGAGAGTCGGCGCTGAAGGCCCAGAGCGCTCTCCACGAACAAAAGACTCTTCCCGGGATGAACCGGCCCATCCAGGTGAAACCGGCCGACAGTGAAGGACGAGGAGaAGACCGGAAGCTGTTTGTGGGCATGCTGGGGAAGCAGCAGAGCGAAGACGACGTTCGGCGGCTCTTCGATTCGTTCGGGCAGATCGAGGAGTGCACCGTCCTGCGGGGGCCTGATGGGGCCAGTAAGGGCTGTGCTTTTGTGAAGTTTTCCAGTCATGCTGAAGCCCAGGCGGCGATTAACAGTCTCCACGGAGGACAGACGATGATGccgggtgCGTCCTCCAGTCTGGTGGTGAAGTTTGCAGACACTGATAAGGAGCGGACGCTGCGCCGGATGCATCAGATGGCCGGTCAGCTCGGGATCTTCAGTCCTATGACCATCCAGTTTGGAGCGTACGGAGCTTACACACACGCTatCCTCCAGCAGCAGCAGGCAGCGATCATGGCAGCGACGCAGGGCTCGTATCTCAACCCCATGGCAGCCATCGCCGCCGCTCAGATGCAGCAGATAGCAGCTTTCAACGTCAACGGCCTGGTGGCTGCACCCATGACACCTTcttcagGCACCAGCACTCCCCCCGGCATCAGCGGCACCGCCGTGCCCAGCATCGCTGCTCCGCTCGGGGTCAACGGCTTCAGCGCTCTGCCTCCTCAGACCAACGGACAGCCTGCCTCCGAAGCCATCTACACCAACGGCATCCACCCGTACCCAGcacaGAGTCCGACGGTGGCTGATCCTCTCCAGCAGGCGTACGCCGGAGTGCAGCACTATGCAGCCTATCCTGCCGCTTATGCACCAATCAGCCAAGCGTTTCCGCAGCAACCAGCCATCATCCCCCAGCAACAGCGGGAAGgacCGGAGGGCTGTAATCTGTTCATTTATCACCTGCCGCAGGAGTTTGGAGACGCCGAGCTCATGCAGATGTTTCTGCCGTTTGGTAACGTAATTTCCGCCAAAGTCTTCGTGGACCGGGCGACCAATCAGAGCAAGTGTTTCGGATTCGTCAGCTTTGATAACCCGTCCAGCGCTCAGGCAGCCATCCAGGCCATGAACGGCTTTCAGATCGGCATGAAGAGGCTCAAAGTCCAGCTGAAGCGGCCCAAGGACGCCAACCGGCCGTACTGACCCTGACTGACCCTGACTGACCCCTGCTCCTTCACTCACAGGTCTGTCCAGACGCTCTTCAACAGCTTTAGTGCTTTAAATAAAGGGTTCAAATGATTAGTGCAAATGAGCTTAATTGCTGTCTGcattaaagcatatatatatacagtatatgttaaCATAAAGACATGACAGATTTCTGGGTGTCTGGTATTGATATATGAATCCTTTTATATTCAGTTTGGTTACAAGTTAGTTACAAATACGTTTCTAACTGATACAAAAATGCGATGAAATGTGTTACAAAAAAGTAACTGCGttccatttagattttttgtatcTCTGTATTCCTATCAGTGTTCTTTAaggcttgtttttgttgtttttatgcataaaagtaAGCCTTGGATGTGATTCAAGCCGACCATGAAAAGGATCTTTGACACACGGTTTCCAccagaaaataaaatcaaatagtTATTGATTATCTAAAGGGTTACTCTCTCGTCTGGAAAAGATTGGGGGTTAAACTCGGGATAAAACTAAAGATTGCTTTCATTTTCAGGAACTGATGATGAATTGCTGAAAGGTGTGCTAGATCTTCAGCACGATTAGTCTTGATTCTCTCACTTCTTTCTGAACAATATTCATACTAAACTGTTATATCCACAGCTGTCAAGCTCTAAAAAAGGaccaaaatatgtatatatattgagaacgagcatcatttttaattcttcagtatttgattttactttgct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250633.1 lncRNA upstream 35295 28380612 ~ 28385954 (+) True LOC122342705
TU46588 lncRNA upstream 45462 28372385 ~ 28375787 (+) False G31551
TU46585 lncRNA upstream 45462 28373484 ~ 28375787 (+) True G31551
TU46586 lncRNA upstream 45462 28373484 ~ 28375787 (+) False G31551
TU46711 lncRNA upstream 150665 28270102 ~ 28270584 (+) True G31631
XR_006250587.1 lncRNA downstream 30953 28568285 ~ 28593867 (+) True LOC122342517
TU46760 lncRNA downstream 109645 28646977 ~ 28652833 (+) True G31665
XR_006250740.1 lncRNA downstream 293303 28830635 ~ 28831298 (+) False LOC122343276
XR_006250780.1 lncRNA downstream 318799 28856131 ~ 28858515 (+) True LOC122343449
TU47023 lncRNA downstream 460396 28997728 ~ 29002977 (+) True G31845
XM_043237901.1 mRNA upstream 10939 28387507 ~ 28410310 (+) False LOC122343436
XM_043236154.1 mRNA downstream 56545 28593877 ~ 28594995 (+) True LOC122342381
XM_043236156.1 mRNA downstream 432919 28970251 ~ 28993117 (+) True LOC122342385
XM_043236158.1 mRNA downstream 468433 29005765 ~ 29034527 (+) False LOC122342386
TU46732 other upstream 68023 28350353 ~ 28353226 (+) True G31649
TU46717 other upstream 100555 28285027 ~ 28320694 (+) False G31636
TU46990 other downstream 293308 28830640 ~ 28893627 (+) False LOC122343276
TU46989 other downstream 349821 28887153 ~ 28893627 (+) False LOC122343276
TU46991 other downstream 349821 28887153 ~ 28893627 (+) True LOC122343276

Expression Profile