Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043237758.1 |
| length | 1200 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 7 |
| gene id | nfyba |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 3973075 ~ 3975787 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006250756.1 | lncRNA | upstream | 165177 | 3806939 ~ 3807898 (+) | True | LOC122343347 |
| TU37989 | lncRNA | upstream | 165513 | 3807049 ~ 3807562 (+) | False | LOC122343347 |
| TU37949 | lncRNA | upstream | 264223 | 3708537 ~ 3708852 (+) | True | G25537 |
| TU37948 | lncRNA | upstream | 266011 | 3706859 ~ 3707064 (+) | True | G25536 |
| TU37947 | lncRNA | upstream | 270704 | 3701834 ~ 3702371 (+) | True | G25535 |
| XR_006250755.1 | lncRNA | downstream | 12896 | 3988683 ~ 4007148 (+) | True | LOC122343346 |
| TU38355 | lncRNA | downstream | 153136 | 4128923 ~ 4129250 (+) | True | G25823 |
| TU38356 | lncRNA | downstream | 153552 | 4129339 ~ 4129628 (+) | True | G25824 |
| TU38357 | lncRNA | downstream | 154357 | 4130144 ~ 4130422 (+) | True | G25825 |
| TU38359 | lncRNA | downstream | 156321 | 4132108 ~ 4132552 (+) | True | G25827 |
| XM_043237744.1 | mRNA | upstream | 13815 | 3909143 ~ 3959260 (+) | False | slc41a2b |
| XM_043237743.1 | mRNA | upstream | 46194 | 3909143 ~ 3926881 (+) | True | slc41a2b |
| XM_043237733.1 | mRNA | upstream | 67144 | 3897077 ~ 3905931 (+) | True | aldh1l2 |
| XM_043237747.1 | mRNA | upstream | 77200 | 3889437 ~ 3895875 (+) | True | samm50l |
| XM_043237555.1 | mRNA | upstream | 203232 | 3760584 ~ 3769843 (+) | True | sult4a1 |
| XM_043237723.1 | mRNA | downstream | 32554 | 4008341 ~ 4039405 (+) | True | srgap1b |
| XM_043237724.1 | mRNA | downstream | 32803 | 4008590 ~ 4039405 (+) | False | srgap1b |
| XM_043237725.1 | mRNA | downstream | 33447 | 4009234 ~ 4039405 (+) | False | srgap1b |
| XM_043237721.1 | mRNA | downstream | 36496 | 4012283 ~ 4039405 (+) | False | srgap1b |
| XM_043237722.1 | mRNA | downstream | 36683 | 4012470 ~ 4039405 (+) | False | srgap1b |
| TU37969 | other | upstream | 234481 | 3737502 ~ 3738594 (+) | True | G25551 |
| TU37922 | other | upstream | 470981 | 3481629 ~ 3502094 (+) | True | G25514 |
| unassigned_transcript_301 | other | upstream | 501940 | 3470366 ~ 3471135 (+) | True | LOC122343352 |
| unassigned_transcript_300 | other | upstream | 525501 | 3447058 ~ 3447574 (+) | True | LOC122343393 |
| unassigned_transcript_299 | other | upstream | 531575 | 3440912 ~ 3441500 (+) | True | LOC122342809 |
| TU38369 | other | downstream | 253842 | 4229629 ~ 4231092 (+) | True | G25837 |
| TU38370 | other | downstream | 257121 | 4232908 ~ 4235244 (+) | True | G25838 |
| TU38543 | other | downstream | 574376 | 4550163 ~ 4628899 (+) | False | G25958 |
| TU38544 | other | downstream | 574376 | 4550163 ~ 4628899 (+) | True | G25958 |
| TU38659 | other | downstream | 953684 | 4929471 ~ 4942735 (+) | False | LOC122343397 |
