Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043237823.1 |
| length | 2946 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 12 |
| gene id | creb3l2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 1369392 ~ 1385823 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0034976 | response to endoplasmic reticulum stress | biological_process |
| GO:0060628 | regulation of ER to Golgi vesicle-mediated transport | biological_process |
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0002062 | chondrocyte differentiation | biological_process |
| GO:0006986 | response to unfolded protein | biological_process |
| GO:0003330 | regulation of extracellular matrix constituent secretion | biological_process |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| id | description |
|---|---|
| K09048 | CREB3; cyclic AMP-responsive element-binding protein 3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37102 | lncRNA | upstream | 37549 | 1329465 ~ 1331843 (+) | True | LOC122342419 |
| TU37074 | lncRNA | upstream | 82319 | 1286612 ~ 1287073 (+) | True | G24925 |
| TU37037 | lncRNA | upstream | 120223 | 1247380 ~ 1249169 (+) | False | LOC122342481 |
| XR_006250559.1 | lncRNA | upstream | 242012 | 1112895 ~ 1127380 (+) | True | LOC122342413 |
| TU36909 | lncRNA | upstream | 436281 | 864840 ~ 933111 (+) | True | G24811 |
| TU37142 | lncRNA | downstream | 170569 | 1556392 ~ 1557778 (+) | True | G24968 |
| XR_006250791.1 | lncRNA | downstream | 284794 | 1670617 ~ 1672760 (+) | False | LOC122343488 |
| TU37284 | lncRNA | downstream | 303155 | 1688978 ~ 1693389 (+) | True | G25071 |
| XR_006250569.1 | lncRNA | downstream | 398414 | 1784237 ~ 1787234 (+) | False | LOC122342451 |
| TU37231 | lncRNA | downstream | 402808 | 1788631 ~ 1789276 (+) | True | G25030 |
| XM_043236325.1 | mRNA | upstream | 647 | 1366719 ~ 1368745 (+) | False | ssbp1 |
| XM_043236326.1 | mRNA | upstream | 647 | 1366853 ~ 1368745 (+) | True | ssbp1 |
| XM_043236330.1 | mRNA | upstream | 3322 | 1352403 ~ 1366070 (+) | True | c4h12orf56 |
| XM_043236338.1 | mRNA | upstream | 17719 | 1346185 ~ 1351673 (+) | True | zgc:162331 |
| XM_043236190.1 | mRNA | upstream | 38360 | 1329452 ~ 1331032 (+) | False | LOC122342419 |
| XM_043236268.1 | mRNA | downstream | 690 | 1386513 ~ 1425816 (+) | True | dgki |
| XM_043236269.1 | mRNA | downstream | 690 | 1386513 ~ 1425816 (+) | False | dgki |
| XM_043236274.1 | mRNA | downstream | 690 | 1386513 ~ 1425816 (+) | False | dgki |
| XM_043236277.1 | mRNA | downstream | 690 | 1386513 ~ 1425816 (+) | False | dgki |
| XM_043236270.1 | mRNA | downstream | 690 | 1386513 ~ 1425816 (+) | False | dgki |
| TU37077 | other | upstream | 78168 | 1288312 ~ 1291224 (+) | True | ndufa5 |
| TU36860 | other | upstream | 703862 | 654092 ~ 665530 (+) | True | G24771 |
| TU36683 | other | upstream | 995310 | 373527 ~ 374082 (+) | True | G24632 |
| TU36680 | other | upstream | 995568 | 373527 ~ 373824 (+) | False | G24632 |
| TU36656 | other | upstream | 1074323 | 293235 ~ 295069 (+) | True | G24609 |
| TU37269 | other | downstream | 284689 | 1670512 ~ 1672959 (+) | True | LOC122343488 |
| TU37230 | other | downstream | 398469 | 1784292 ~ 1788096 (+) | True | LOC122342451 |
| TU37871 | other | downstream | 1729685 | 3115508 ~ 3117988 (+) | True | ninj2 |
| XR_006250571.1 | other | downstream | 1733706 | 3119529 ~ 3306758 (+) | False | erc1b |
| unassigned_transcript_298 | other | downstream | 2053308 | 3439131 ~ 3439654 (+) | True | LOC122342808 |
