RNA id: XM_043237833.1


Basic Information

Item Value
RNA id XM_043237833.1
length 2942
RNA type mRNA
GC content 0.39
exon number 5
gene id nudt14
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 17266457 ~ 17293636 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGCTTCCGTAGACATTTCCCCCTATTCTCCTCCAGTAGTCTGCGGCTGTGCCATCTGTGGCGAGAAGTAACCGTGGGCAGCTATATCAAAGCCATGGAGCAGATCAATAATATTCAGGTGGTTCCGTGCACCAGTTCTAACTATCTGAGACCGTTTAGGGTGCATTATAACCAGaatggaACAAAGAAGTCCTGGGACTTTATGCAAACCCATGATAGTGTCTCTGTGCTGATTTTCAACACCACCTCACACTGTTTCATCCTGGTCAAGCAGTTCCGCCCAGCTGTATACATGAGCGAATGGGAGCGCAGCAAACCCAAGCCCCTGCAACCTGCAGAAGAAGAGTCAGCAGAAGCTGCACTAGCAGAACCTAAAGTCCCGGAAGAGGACAAACCAGGAGAGTCAAGTGAAGACACTTCAAGCCACCAACCTCCCGCATCGGCCGGTGTGACCTACGAGCTGTGCGCAGGATTGGTGGACAAACCCAATCTCTCTCTGGAAGAGATTGCCAGGCAGGAAGTGCTAGAAGAGTGTGGCTTTGATGTACCAGTCACCAAGCTGAGAAAGATAACGTCATACAGGTCAGGAGTCGGAGTGACCGGATCGAAGCAGACCATGTTCTACGCTGAGGTGTCCGATGAGAATCGCGTCGGAGAGGGAGGAGGGAAACCCCAAGAGGGCGAATTGATCGAGGTTGTCAAAGTTCCCCTTCACGAAGCCATGACCTTCGCCTTCGACGAGAGCATCCCGAAAACGATGGGCGTCATTTTCAGCTTCATCTGGTTCCACAGCAACATGTCACCGAAGTACAAGATCTCCACCAACGTGTAACGTGACGGTTCCGAGCCATCGAGAAATACAAGtcattgcatacatttttatatatagtaatcAAAATGGTCACTAACTGttaattattttgctatttCTTACACTTTTATCTGTTTGTTGTGGTTCTAGCTATCGTCTTATTTCAGACTGAAGCCGCACTTGTGTGCTATCCGCTGAAAAGGTTCATCGTGAGTTTGTTTTGTGTAACtgaatgctttgtttttaacatgCCAGGAATTTCAGCCAGCCATGTGAATCACACCGCGACCCTTAAAGACTTTGTGACAGTGATCTATTCCACTCTAATTTGAGAGGGTAAGATCTGAAAGACCAtgttgataccatcagagagaGAATCACAGACCCGGATCAGTCATGATTGAAGCTGTACTTTGTGGTCAGAAAGCGAGACCTCTAGCCATATTCCCACCAATTTTGCAGGATATTTAGTAGAATGACGTTcatttttgaatataaataagcaagtaaataatcacaataattaaCGTGAATTATGTGAACAACACACAGGCAGCTACACAAATGAGATAACTTGAGAGCCACTTCTTATAAAACAATCattgacaaagaaaaacaattacGCTCTTGCAAATATCTCAGGTCCAAAGCTGACTTTGGAACATTCAGGGTtagtgatgatgctgaaaaatactGAGATGTTTTTTATTGCCGCTTAACATTAAGTTGATcttctgagtgtgtgttttgcacagaatttatttatgaaatatctaCTACAATAACCTAAAGTGTGAGTACAGTGCTAGTGCTACAGgtttaaagctgctttgccaTAATCATCATATCTATAACGCCGTTCTGAATTCTTTCAGAACTTATGGAACAGAATATATGAGGGCTGCATGAGCTTGCCTGCTgaagtgaaaaaatatatatacatatatatatatatatatatatattttaaataccttATAGTGTCAGAAGACTGGTACCTCCTAAAGTCACGGCAACGAAACATAGTGACTTTCTGAAATCTCTTGAAAACGATACTTGAAAATCATTTGTTGCGGTTTACCGTATGAATATATAGGATGATGACTACAAAGCTTGAATATAATCAATACGCCCTCAATTTTCTCCACGATACCTCCAAGATTTGAGAGGCTGCTTGCAACTTTCTGAATCCGATTTTCGCTCTGTTGTAGTTCAGTTCAGATTCTCTTATGCACAAAGCATTCACTAGTTTAATTTGAATCGATCAATTAATCAGTCGATCGTTTTTTTTCCTATATCTTGTTGGCTTAATTATTTTGTGAATGATATCGAAGTGCACAAACATTTGTTAATGCTATCTTTGTTCTTGTCATCATGACAACGATCACTACAGTGTTAAAGAATATCGTCAGCTGATTGGATCTTTCTGTAAAGCATTTTCCTTTGTCCTATCACTGTACTCTGTAGTCTATATTCTATTGTGATTGAGTGTTATAACTTTATCAATACATACGGTCAATGTGCAAACTTACAAATTACCATGTTCATATAATCAGTCAAAAACAAGTGTGGAAAAAGACAAACAGGTTTGGTTTGGTCCACAATTGGAGCGTGTTTTAACTTCAAGCACTCCTTCTAAAGTATGCAAATGAGACATTTAAgaattatgcatttgttttgaaagcATTATTTCATATCGCAATGCCTCAGATATAATTTCCTCATTTTTCTTAATCTCTTCTtataaaagaaactttaaacTTGTTTGAGTGTTTTGTACGTTTATCTCAGGATAGGGcttgatttcttttaaaaatgaataaattgttgatttattgTCATGTGCCACTGTTATTAACGCTTGATTTTCAGACTCAGTATTTCATGAGAGGTGTTCACTACTGTATTtccatttcttcttttgaaTCTCACATTTATTTACTGATCGTTTTCAATTACGACACCTCaaacgaatatatatatatttcaaatatgtaatatatatatacaattaagtatcttttgacatttgaaaatatatatatttcaaaaatgaaatattgcatGTGCACTCTGTATTACATTGATCTGCAttcagtttaaatgaataaaaaggttACTGCCTTAGGTCA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides molecular_function

KEGG:

id description
K08077 NUDT14; UDP-sugar diphosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU43233 lncRNA upstream 45841 17220257 ~ 17220616 (+) True G29181
TU43230 lncRNA upstream 46943 17219142 ~ 17219514 (+) True G29178
XR_006250625.1 lncRNA upstream 147351 17090539 ~ 17119106 (+) True LOC122342667
XR_006250626.1 lncRNA upstream 147351 17093963 ~ 17119106 (+) False LOC122342667
TU43107 lncRNA upstream 180600 17046871 ~ 17085857 (+) False G29089
TU43244 lncRNA downstream 739 17294375 ~ 17294640 (+) True G29192
TU43253 lncRNA downstream 91653 17385289 ~ 17385680 (+) True G29200
TU43359 lncRNA downstream 260197 17553833 ~ 17554190 (+) True G29272
XR_006250563.1 lncRNA downstream 373514 17667150 ~ 17669761 (+) True LOC122342426
XR_006250674.1 lncRNA downstream 416419 17710055 ~ 17711711 (+) True LOC122343158
XM_043236670.1 mRNA upstream 89960 17122433 ~ 17176497 (+) True brf1b
XM_043236556.1 mRNA upstream 183337 17041350 ~ 17083120 (+) False ppp1r13bb
XM_043237097.1 mRNA downstream 14657 17308293 ~ 17348870 (+) False jag2b
XM_043237095.1 mRNA downstream 14658 17308294 ~ 17348870 (+) True jag2b
XM_043237096.1 mRNA downstream 14658 17308294 ~ 17348870 (+) False jag2b
XM_043237874.1 mRNA downstream 103499 17397135 ~ 17410852 (+) True esr2a
XM_043237875.1 mRNA downstream 103499 17397135 ~ 17410852 (+) False esr2a
TU42966 other upstream 792076 16473898 ~ 16474381 (+) True G28982
TU42861 other upstream 1280731 15985219 ~ 15985726 (+) True G28899
TU42853 other upstream 1424602 15841372 ~ 15841855 (+) True G28891
TU42722 other upstream 1611276 15650295 ~ 15655181 (+) True cdkn1d
TU42701 other upstream 1710775 15439334 ~ 15555682 (+) True G28806
TU43729 other downstream 1006779 18300415 ~ 18301189 (+) True G29526
TU43756 other downstream 1142824 18436460 ~ 18461317 (+) True G29545
TU43926 other downstream 1589543 18883179 ~ 18886402 (+) True G29642
TU44195 other downstream 1996584 19290220 ~ 19342911 (+) True G29814
TU44225 other downstream 2437626 19731262 ~ 19786128 (+) False G29835

Expression Profile