RNA id: XM_043237930.1


Basic Information

Item Value
RNA id XM_043237930.1
length 3240
RNA type mRNA
GC content 0.49
exon number 25
gene id ano2b
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 1530792 ~ 1562547 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCCCATTCACGAGTCCTAAATATTAAGCGCAAACCAAGCGCTATGTAACAGAGATTCACGATGCAATAAACGGATGTTCGCGGAATGTATTTTTTCTCTTCAAAAGATGGTCTTGAACCTGTTGGCGACTCCATCTTTACGCACGCGCGAGAGCCCCTCCGGCGCGTAATGATGCGCCCCGGCGCTTGGAGACGCGCAGGTATTCCTCCAGGGATAATTAGTCAGGGACAAATCAGAAGTTTCTGTGGAGATGCGTTCTGTTGTGCGTGAAGCAAAGCTTTGAGCTTCCCAGTCAACGGTGCCAAAATCAGACAGACGGATGGATTTCATGCTTTGCGAGTTCGGTGGATAAACAGAGGGAAAGATGGATGGTGGCGTCTCTGTAGGGTGACATCAGAAACGGGCATGCCACCAGAAACGCAAACAATTTTCCAGGAACGCCGAGGAACTGTTGCTGTTTCTTAtcgtttttgtgtgttttttttaagtgtgacaACATGCTGCAGACAAGTGAAAACAAGATACACGTGGCCAATAACCTGATGGACATGGACCAAGACCCTCGCAAACGGCTGTACTTTGCTGACGGCCGAAGGAAAGTGGACTATGTGCTGGTGTACCACTACCGAAAACGCTCCTCCGTCAGGGGGTCTCCTAGCCAACACAGACTGTCCATCATCTCCAATGGAAGTTATCCTTTAGGAGTGGAGGAGAAAGACCCAGAGGGAGGGAAGGAAGAACCTGTGGAGGTGGTGGTGAACGTTGGACCCTCGGACCCCGCTGATGGGGAGAAAATTATGATTCGAGAGGAGTTTGAGGGTAATTTAAAGGATGCTGGGCTGGAAATTGAGCGTGATAAAGAGACCAAGGCTCATGGTCATGCTTTCATCCGGCTACATGCGCCTTGGCAAGTGTTGAGCAGAGAGGCAGAGTTTCTCAAGATCAAAGTGCCCACCAAGAAGAGTTACGAGTTAAGGGAAGAAAAAGGTCTGGCTGCTACCATGAATGAAGTGTGGCGGAAGTTAAATCAACCGTTTCAGCCTAAAGTGCCCCATCACGAGCAAGATCACAGCCGTACCAAGTTCCTTTCACACTGTTTCTCCCGGGACAAACTCCATCTTTACAACATCAAGTCAAAGGACACCTTCTTTGACAACGCCACAAGGAGCCGAATAGTGTATGAAATCCTCAGACGCACCGCCTGCACCAGGACCTGCCAAACCATGGGTATCACCACATTGATAGCCAACGGGGTCTATGATTCAGCGTTCCCGCTACATGATGGAGACTTCCACCCCAATGGACAAGCTGAGGGGAAGAACGACAGACAACTGTTACATGATGAATGGGCAAGATACGGTGCTTTTTACAAGTATCAGCCTGTTGATCTTATCAGGAAATACTTTGGCGAGAAGATAGGTCTCTACTTTGCCTGGCTTGGTGTCTATACTCAGCTTTTGATCCCTGCGTCTGTGGTGGGCATCATCGTGTTCTTCTATGGCTGGGCCACTGTGGAAACAAACATACCTAGCCAGGAGATGTGTGACGAAGATCAGAACTTCACTATGTGTCCCCTTTGCGATCGAGCATGTGACTACTGGCATCTGAGCACAGCGTGTGGCACGGCACGTGCCAGCCATCTCTTTGACAACCCGGCCACCGTGTTCTTCGCCATCTTCATGTCGCTCTGGGctGCCATGTTTCTAGAGCACTGGAAGCGCAGACAGATCAGTCTGAACTATAGCTGGGATCTGACAGGCATGGAAGAGGAGGAGgaACATCCCAGACCCAAATACGAAACGATTCTCCTTCAGAAGAGgcaaaggaagaagaaaaataaaaagaacaaaaatgagCCTGAGAGAGGTGTGGACGAGAGCGGGGAACTGGGGAAGGACAAATGGAGGCAGAGGTTACTGTCAGCCATGGCAGCTGGGAATCCGACTGGACATGAGAAGCTAACATGGAGGGACAGACTACCTGGATATTTAATCAACATTTCCTCTATTCTGTTCATGTTTGGAGTGACTTGCTCTGCCGTCTTCAGTGTCATCATCTACCGCATCACCATCTCCGCCCTTATGGCAATGAGCCCGGATCCAGAGGTGAAGTCTAACGTACGGGTGACCGTCACGGCCACCGCCGTCATCATCAACCTGGTGGTCATCCTCATCCTGGATGAGATATACGGCATGGTTGCTGCCTGGCTGACAGAACTGGAGATCCCTAAAACGGAGACCAACTTTGAGGAGCGTCTCATTCTGAAGGCTTTCCTTCTGAAGTTCATGAATGCCTATGCACCCATCTTCTATGTGGCCTTCTTCAAAGGGAGGTTTGCTGGCCATCCCGGTAACTATGTTTATGTCTTCAATGATTATCGTATGGAAGAGTGTGCTCCTGGAGGCTGTCTGATTGAACTCTGTATCCAGCTCAGTATCATCATGCTGGGGAAGCAGCTTATTCAGAATAACATCTTTGAGATTGGCATTCCAAAGCTGAAAAAGCTGTGCCGCACACTCAAGGACAAAGAGCGGGTGCCCAAGGAGATTGTGGAGCAGCCGGGTCGCCGCCAGCAGTGGCACCTGGACTATGACTTGGAGCCTTTTGATGGACTCACACCTGAATACATGGAGATGATCATTCAGTTTGGTTTTGTGTCACTCTTTGTGGCCTCGTTCCCTCTGGCTCCGCTATTCGCCCTCTTAAACAACGTCATCGAGATCCGCCTCGATGCCAAGAAGTTCGTCAGGGAGCTTCGCAGGCCAGATGCCATTAGGGCCAAAGATATCGGTATCTGGTACAACATCTTGAGTGGTTTGGGAAAGTTCTCAGTCATCATCAATATTTCATCCCTCGCTTGGTCTACCAGTACATGTACAGCGAGACGGGGACCATGCATGGCTTTATCAACCACACGCTCTCTTACTTTAATGTCAGCAACTTTAAACCAGGAACTGTGCCTTCCATCTCCGGTCTCGGCAAAGACATTGCATTCTGcaggtACAAGGACTACAGAGAACCACCATGGTCAACTGAGCCTTACCAATTCTCCAAACAGTACTGGTCAGTTCTAGCGGCTCGATTAGGTTTCGTCATATTGTTCCAGAACCTGGTGATAACCATGAGCATGCTGGTGGCCTGGGTGATCCCAGACGTGCCCAAAAACATCAGCGAGCAGCTAAAGAAGGAGAAGACTCTTTTGGTGGATGTCTTCTTGAATGAAGAAAAGGAGAAGTTGCA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37215 lncRNA downstream 51158 1478609 ~ 1480893 (-) True G25019
TU37165 lncRNA downstream 102617 1360961 ~ 1429434 (-) True G24982
TU37228 lncRNA upstream 7746 1570293 ~ 1575419 (-) True G25027
TU37229 lncRNA upstream 13514 1576061 ~ 1576716 (-) True G25028
TU37318 lncRNA upstream 14654 1577201 ~ 1577725 (-) True G25098
TU37317 lncRNA upstream 17933 1580480 ~ 1582614 (-) False LOC122342802
TU37323 lncRNA upstream 32173 1594720 ~ 1595288 (-) False selenoo2
XM_043236687.1 mRNA downstream 58826 1468197 ~ 1473225 (-) True gnsa
XM_043236189.1 mRNA downstream 188021 1331022 ~ 1344030 (-) True slc13a4
XM_043236820.1 mRNA downstream 208655 1289926 ~ 1323396 (-) False ptprz1b
XM_043236918.1 mRNA upstream 18333 1580880 ~ 1586189 (-) True LOC122342802
XM_043237039.1 mRNA upstream 25732 1588279 ~ 1591305 (-) False LOC122342888
XM_043237037.1 mRNA upstream 25732 1588279 ~ 1591305 (-) True LOC122342888
XM_043237040.1 mRNA upstream 28842 1591389 ~ 1593369 (-) True LOC122342889
XM_043236890.1 mRNA upstream 31737 1594284 ~ 1604690 (-) True selenoo2
TU37001 other downstream 461955 1069160 ~ 1070096 (-) True G24875
TU36940 other downstream 598943 908946 ~ 933108 (-) False pik3cg
TU36783 other downstream 1340809 186460 ~ 191242 (-) True G24708
TU36763 other downstream 1458565 56637 ~ 73486 (-) False si:dkey-97m3.1
TU36762 other downstream 1498135 28072 ~ 33916 (-) False LOC122343420
XR_006250650.1 other upstream 46813 1609360 ~ 1618298 (-) False zgc:113263
XR_006250649.1 other upstream 46813 1609360 ~ 1618298 (-) False zgc:113263
TU37319 other upstream 91044 1653591 ~ 1654807 (-) False ccdc167
TU37444 other upstream 339296 1901843 ~ 1902567 (-) False rsph9
XR_006250653.1 other upstream 480406 2042953 ~ 2088579 (-) True cald1a

Expression Profile