RNA id: XM_043238007.1


Basic Information

Item Value
RNA id XM_043238007.1
length 929
RNA type mRNA
GC content 0.47
exon number 6
gene id bik
representative False

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 9581569 ~ 9584512 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TATTGGCCAGACATGAAGTGACACCCATCGCCGCTTCCTGAGTGTAAAGCTGCAGGCGTGGCTGCGGGTGATCAGTGTACTGGGACACATCACAGGAAGAGAGCAAGATTAAAGGACGCTGCTGGCGGCGTCCGATTTAATCTACAAACAAGAGCACAATGGTGGAAGAAACGAAACAGCGAAAAAACGTCACTTCCCTCCGGGCTGGACCTGGTGAGGTAGACCACAGCACTCGCTATAACGTCGATACGAGAGTTTCCCAGCGTATCGGACGACAGCTGGCTCTTATAGGGGACGAATTGGACTCTAAGTGGCGCGAACAATTGCCCCTCCAATGGCAGCCCCTGAATTTTGGAATCTATCCGTACGTCCTAACCAGGAGAGCATTCTCTGGGATCTTCAACAACGTCTGGGGGTCCAAAATTATGCCAGTGCTGAGGACGTCCTGGCTGGTTCCACATCTTCAAAATGGCCGCCAGGAGGCCAAGAAGTGGGCGGCCTTGGTATCCAACTTGCCCGTTGCCGACTGGTCTCGCAGGACCACGTGTATACTAGCATCTGCTTTACTTCTGGTCACCGTTTCCATCTTCCTTATAACTTGGAACGAATATGAAGGCTGAACGTGACATCGAGGGGGTCAAGAGCTGGTCTTTGGCTCAAATGTAACCGAAGctgattttttaaagaaaactgcttattttaaaatctcttttatAACTGATTTGAATGAAGTGCTGGTTCACATATAAGTCAATATGTGCAGGATTTTGacaaaggttgttttttttgtgtgtgtgttttgggtctACTGCTGGATATTTGGGCCAATGAATTGTTACCTCTTCCTCTAAAAGCATTTCTGCACTACTAAAGGAAGCTGGACTTTCCAAACCAACAAGcgcaataaaacttttaaaaagaaaaacaaa

Function

GO:

id name namespace
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process biological_process
GO:0043065 positive regulation of apoptotic process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU40761 lncRNA upstream 24852 9554960 ~ 9556718 (+) True LOC122342620
XR_006250619.1 lncRNA upstream 25353 9554973 ~ 9556217 (+) False LOC122342620
TU40744 lncRNA upstream 44483 9536610 ~ 9537087 (+) True G27498
TU40618 lncRNA upstream 73642 9504080 ~ 9507928 (+) True wnt7ba
TU40610 lncRNA upstream 85917 9495434 ~ 9495653 (+) True G27407
XR_006250603.1 lncRNA downstream 75975 9660487 ~ 9673677 (+) True LOC122342587
TU40854 lncRNA downstream 101987 9686499 ~ 9872003 (+) True G27562
TU40944 lncRNA downstream 573647 10158159 ~ 10257553 (+) False G27629
TU40958 lncRNA downstream 678357 10262869 ~ 10264200 (+) True G27643
TU40968 lncRNA downstream 702966 10287478 ~ 10365571 (+) True G27651
XM_043236981.1 mRNA upstream 4609 9556829 ~ 9576961 (+) True slc26a3.2
XM_043236575.1 mRNA upstream 27010 9545685 ~ 9554560 (+) False slc26a4
XM_043236573.1 mRNA upstream 27010 9545687 ~ 9554560 (+) True slc26a4
XM_043236574.1 mRNA upstream 27010 9546318 ~ 9554560 (+) False slc26a4
XM_043236700.1 mRNA upstream 59537 9515633 ~ 9522033 (+) False wnt7ba
XM_043236521.1 mRNA downstream 56736 9641248 ~ 9654380 (+) True impdh1b
XM_043236522.1 mRNA downstream 56743 9641255 ~ 9654380 (+) False impdh1b
XM_043236524.1 mRNA downstream 58950 9643462 ~ 9654380 (+) False impdh1b
XM_043236527.1 mRNA downstream 58951 9643463 ~ 9654380 (+) False impdh1b
XM_043236523.1 mRNA downstream 60113 9644625 ~ 9654380 (+) False impdh1b
TU40764 other upstream 2996 9577315 ~ 9578574 (+) True G27508
XR_006250785.1 other upstream 186842 9381542 ~ 9394728 (+) False cfap54
TU40537 other upstream 399338 9168776 ~ 9182232 (+) False G27360
XR_006250548.1 other upstream 1038858 8533816 ~ 8542712 (+) False etnk1
TU40115 other upstream 1332347 8247912 ~ 8249223 (+) True G27079
TU40736 other downstream 2807 9587319 ~ 9590318 (+) True G27490
TU40943 other downstream 573647 10158159 ~ 10203768 (+) False G27629
TU40942 other downstream 614134 10198646 ~ 10203768 (+) True G27629
TU40966 other downstream 781240 10365752 ~ 10367912 (+) False lamtor4
TU41104 other downstream 1115034 10699546 ~ 10700125 (+) False zmp:0000000650

Expression Profile