Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006250591.1 |
| length | 357 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC122342534 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 4989167 ~ 4991312 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006250590.1 | lncRNA | upstream | 979 | 4986179 ~ 4988188 (+) | True | LOC122342533 |
| XR_006250776.1 | lncRNA | upstream | 3956 | 4983221 ~ 4985211 (+) | True | LOC122343429 |
| TU38607 | lncRNA | upstream | 221346 | 4765864 ~ 4767821 (+) | True | G26008 |
| TU38569 | lncRNA | upstream | 245564 | 4730837 ~ 4743603 (+) | True | G25976 |
| TU38575 | lncRNA | upstream | 298384 | 4689375 ~ 4690783 (+) | True | G25981 |
| XR_006250744.1 | lncRNA | downstream | 762 | 4992074 ~ 4994254 (+) | True | LOC122343284 |
| XR_006250592.1 | lncRNA | downstream | 3637 | 4994949 ~ 4997226 (+) | True | LOC122342545 |
| XR_006250595.1 | lncRNA | downstream | 9525 | 5000837 ~ 5003088 (+) | True | LOC122342552 |
| XR_006250742.1 | lncRNA | downstream | 12541 | 5003853 ~ 5006063 (+) | True | LOC122343281 |
| XR_006250743.1 | lncRNA | downstream | 15486 | 5006798 ~ 5008999 (+) | True | LOC122343282 |
| XM_043237820.1 | mRNA | upstream | 23970 | 4958676 ~ 4965197 (+) | False | dmtf1 |
| XM_043237821.1 | mRNA | upstream | 23970 | 4958881 ~ 4965197 (+) | True | dmtf1 |
| XM_043237834.1 | mRNA | upstream | 44287 | 4935945 ~ 4944880 (+) | True | LOC122343397 |
| XM_043237676.1 | mRNA | upstream | 60465 | 4894882 ~ 4928702 (+) | True | LOC122343293 |
| XM_043237678.1 | mRNA | upstream | 94432 | 4889423 ~ 4894735 (+) | False | LOC122343294 |
| XM_043236024.1 | mRNA | downstream | 62478 | 5053790 ~ 5068865 (+) | True | syt10 |
| XM_043236022.1 | mRNA | downstream | 62479 | 5053791 ~ 5068865 (+) | False | syt10 |
| XM_043237966.1 | mRNA | downstream | 179438 | 5170750 ~ 5172410 (+) | True | ccdc59 |
| XM_043237939.1 | mRNA | downstream | 225147 | 5216459 ~ 5224944 (+) | False | cracr2ab |
| XM_043237941.1 | mRNA | downstream | 225152 | 5216464 ~ 5224944 (+) | True | cracr2ab |
| TU38659 | other | upstream | 46432 | 4929471 ~ 4942735 (+) | False | LOC122343397 |
| TU38663 | other | upstream | 46432 | 4935929 ~ 4942735 (+) | False | LOC122343397 |
| TU38543 | other | upstream | 360268 | 4550163 ~ 4628899 (+) | False | G25958 |
| TU38544 | other | upstream | 360268 | 4550163 ~ 4628899 (+) | True | G25958 |
| TU38370 | other | upstream | 753923 | 4232908 ~ 4235244 (+) | True | G25838 |
| XR_006250627.1 | other | downstream | 363020 | 5354332 ~ 5391626 (+) | False | pcloa |
| unassigned_transcript_304 | other | downstream | 407568 | 5398880 ~ 5398967 (+) | True | trnay-gua_2 |
| TU39144 | other | downstream | 790632 | 5781944 ~ 5853381 (+) | False | LOC122342465 |
| TU39141 | other | downstream | 859117 | 5850429 ~ 5853381 (+) | False | LOC122342465 |
| TU39185 | other | downstream | 901673 | 5892985 ~ 5897771 (+) | False | LOC122342837 |
