Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006250615.1 |
| length | 537 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 4 |
| gene id | LOC122342618 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 9547639 ~ 9552161 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0009651 | response to salt stress | biological_process |
| GO:0055081 | anion homeostasis | biological_process |
| GO:0055085 | transmembrane transport | biological_process |
| GO:0008272 | sulfate transport | biological_process |
| GO:0006821 | chloride transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008271 | secondary active sulfate transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU40803 | lncRNA | downstream | 2218 | 9545208 ~ 9545421 (-) | True | G27532 |
| TU40714 | lncRNA | downstream | 43639 | 9498716 ~ 9504000 (-) | True | G27469 |
| XR_006250778.1 | lncRNA | downstream | 205900 | 9330007 ~ 9341739 (-) | True | LOC122343442 |
| TU40644 | lncRNA | downstream | 523562 | 9023877 ~ 9024077 (-) | True | G27425 |
| TU40633 | lncRNA | downstream | 543416 | 9003923 ~ 9004223 (-) | True | G27417 |
| TU40813 | lncRNA | upstream | 13289 | 9565447 ~ 9568297 (-) | True | G27540 |
| TU40835 | lncRNA | upstream | 45299 | 9597457 ~ 9654377 (-) | False | G27549 |
| TU40837 | lncRNA | upstream | 84791 | 9636949 ~ 9654377 (-) | True | G27549 |
| TU40887 | lncRNA | upstream | 145538 | 9697696 ~ 9744787 (-) | True | G27581 |
| TU40939 | lncRNA | upstream | 463024 | 10015182 ~ 10015754 (-) | True | G27627 |
| XM_043236576.1 | mRNA | downstream | 4132 | 9534425 ~ 9543507 (-) | True | def6c |
| XM_043236698.1 | mRNA | downstream | 16589 | 9523067 ~ 9531050 (-) | True | atxn10 |
| XM_043236699.1 | mRNA | downstream | 70925 | 9461383 ~ 9476714 (-) | True | pparaa |
| XM_043236705.1 | mRNA | downstream | 86583 | 9458750 ~ 9461056 (-) | True | cdpf1 |
| XM_043238003.1 | mRNA | upstream | 25136 | 9577294 ~ 9580814 (-) | True | cbll1 |
| XM_043238004.1 | mRNA | upstream | 31480 | 9583638 ~ 9586982 (-) | True | mcat |
| XM_043238005.1 | mRNA | upstream | 35838 | 9587996 ~ 9632618 (-) | True | rap1b |
| XM_043236519.1 | mRNA | upstream | 102298 | 9654456 ~ 9674110 (-) | False | prrt4b |
| XM_043236518.1 | mRNA | upstream | 102299 | 9654457 ~ 9674005 (-) | False | prrt4b |
| XR_006250565.1 | other | downstream | 247460 | 9271972 ~ 9300179 (-) | False | uhrf1bp1l |
| XR_006250745.1 | other | downstream | 538335 | 9004260 ~ 9009304 (-) | False | klhl42 |
| XR_006250786.1 | other | downstream | 606368 | 8894184 ~ 8941271 (-) | False | LOC122343470 |
| TU40990 | other | upstream | 803553 | 10355711 ~ 10357205 (-) | False | zgc:193726 |
| XR_006250794.1 | other | upstream | 806266 | 10358424 ~ 10363566 (-) | True | zgc:193726 |
| TU41528 | other | upstream | 1869911 | 11422069 ~ 11424083 (-) | False | ppfia2 |
| XR_006250735.1 | other | upstream | 1874339 | 11426497 ~ 11545812 (-) | False | ppfia2 |
| TU41650 | other | upstream | 2462473 | 12014631 ~ 12015767 (-) | True | G28093 |
