Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006250673.1 |
| length | 310 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 4 |
| gene id | LOC122343157 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 17732403 ~ 17733334 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU43565 | lncRNA | downstream | 31030 | 17699424 ~ 17701373 (-) | True | G29408 |
| TU43543 | lncRNA | downstream | 89766 | 17642379 ~ 17642637 (-) | True | G29388 |
| TU43360 | lncRNA | downstream | 178439 | 17553762 ~ 17553964 (-) | True | G29273 |
| TU43271 | lncRNA | downstream | 382897 | 17349289 ~ 17349506 (-) | True | G29212 |
| TU43231 | lncRNA | downstream | 512950 | 17219151 ~ 17219453 (-) | True | G29179 |
| TU43563 | lncRNA | upstream | 10118 | 17743452 ~ 17744244 (-) | False | LOC122342228 |
| TU43581 | lncRNA | upstream | 16477 | 17749811 ~ 17814034 (-) | True | G29420 |
| TU43586 | lncRNA | upstream | 62738 | 17796072 ~ 17805409 (-) | True | G29425 |
| TU43611 | lncRNA | upstream | 84228 | 17817562 ~ 17817933 (-) | True | G29440 |
| TU43614 | lncRNA | upstream | 86026 | 17819360 ~ 17822470 (-) | False | G29442 |
| XM_043237338.1 | mRNA | downstream | 1006 | 17728522 ~ 17731397 (-) | True | LOC122343038 |
| XM_043237340.1 | mRNA | downstream | 1249 | 17728522 ~ 17731154 (-) | False | LOC122343038 |
| XM_043237339.1 | mRNA | downstream | 1299 | 17728522 ~ 17731104 (-) | False | LOC122343038 |
| XM_043236039.1 | mRNA | downstream | 5607 | 17720148 ~ 17726796 (-) | True | LOC122342227 |
| XM_043237362.1 | mRNA | downstream | 12613 | 17717764 ~ 17719790 (-) | True | LOC122343057 |
| XM_043236040.1 | mRNA | upstream | 1272 | 17734606 ~ 17744543 (-) | True | LOC122342228 |
| XM_043237272.1 | mRNA | upstream | 106730 | 17840064 ~ 17851149 (-) | True | ckap2l |
| XM_043237240.1 | mRNA | upstream | 121367 | 17854701 ~ 17880596 (-) | True | LOC122342984 |
| XM_043237241.1 | mRNA | upstream | 121367 | 17854701 ~ 17880477 (-) | False | LOC122342984 |
| XM_043237242.1 | mRNA | upstream | 128249 | 17861583 ~ 17880796 (-) | False | LOC122342984 |
| TU43541 | other | downstream | 93694 | 17637159 ~ 17638709 (-) | False | srd5a3 |
| TU43209 | other | downstream | 610274 | 17118628 ~ 17122129 (-) | True | xrcc3 |
| TU43174 | other | downstream | 714580 | 17006927 ~ 17017823 (-) | True | G29135 |
| XR_006250655.1 | other | downstream | 832108 | 16886974 ~ 16900295 (-) | True | prkchb |
| TU43020 | other | downstream | 1023443 | 16707774 ~ 16708960 (-) | True | G29022 |
| TU43577 | other | upstream | 2016 | 17735350 ~ 17736274 (-) | True | G29417 |
| TU43653 | other | upstream | 237271 | 17970605 ~ 17979922 (-) | True | G29473 |
| TU43941 | other | upstream | 675226 | 18408560 ~ 18428343 (-) | True | G29653 |
| XR_006250671.1 | other | upstream | 923646 | 18656980 ~ 18661653 (-) | True | LOC122343054 |
| XR_006250670.1 | other | upstream | 923646 | 18656980 ~ 18661649 (-) | False | LOC122343054 |
