Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006250698.1 |
| length | 494 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC122343178 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 20459370 ~ 20462342 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006250679.1 | lncRNA | upstream | 16145 | 20440548 ~ 20443225 (+) | True | LOC122343162 |
| XR_006250680.1 | lncRNA | upstream | 16264 | 20440548 ~ 20443106 (+) | False | LOC122343162 |
| XR_006250678.1 | lncRNA | upstream | 16363 | 20440548 ~ 20443007 (+) | False | LOC122343162 |
| TU44354 | lncRNA | upstream | 17364 | 20323680 ~ 20442006 (+) | True | G29918 |
| XR_006250693.1 | lncRNA | upstream | 20862 | 20437665 ~ 20438508 (+) | True | LOC122343173 |
| TU44363 | lncRNA | downstream | 36903 | 20497097 ~ 20497868 (+) | True | G29927 |
| TU44381 | lncRNA | downstream | 170626 | 20630820 ~ 20631329 (+) | True | G29945 |
| TU44383 | lncRNA | downstream | 185063 | 20645257 ~ 20645535 (+) | True | G29947 |
| TU44458 | lncRNA | downstream | 325115 | 20785309 ~ 20785530 (+) | True | G30005 |
| TU44456 | lncRNA | downstream | 420255 | 20880449 ~ 20882908 (+) | True | G30003 |
| XM_043236068.1 | mRNA | upstream | 13234 | 20443346 ~ 20446136 (+) | True | LOC122342274 |
| XM_043237447.1 | mRNA | upstream | 66996 | 20391465 ~ 20392374 (+) | True | LOC122343110 |
| XM_043237303.1 | mRNA | upstream | 81264 | 20376410 ~ 20378106 (+) | True | LOC122343026 |
| XM_043236067.1 | mRNA | upstream | 112646 | 20344346 ~ 20346724 (+) | False | LOC122342270 |
| XM_043236064.1 | mRNA | upstream | 274872 | 20183653 ~ 20184498 (+) | True | LOC122342265 |
| XM_043236069.1 | mRNA | downstream | 8032 | 20468226 ~ 20469061 (+) | True | LOC122342275 |
| XM_043237472.1 | mRNA | downstream | 10476 | 20470670 ~ 20476708 (+) | False | LOC122343122 |
| XM_043237475.1 | mRNA | downstream | 12642 | 20472836 ~ 20476708 (+) | True | LOC122343122 |
| XM_043236074.1 | mRNA | downstream | 45217 | 20505411 ~ 20515629 (+) | True | LOC122342276 |
| XM_043237273.1 | mRNA | downstream | 82938 | 20543132 ~ 20559014 (+) | True | LOC122343005 |
| TU44357 | other | upstream | 90554 | 20367675 ~ 20368816 (+) | True | G29921 |
| XR_006250910.1 | other | upstream | 211141 | 20248111 ~ 20248229 (+) | True | LOC122343930 |
| unassigned_transcript_379 | other | upstream | 352243 | 20107054 ~ 20107127 (+) | True | trnam-cau_25 |
| unassigned_transcript_377 | other | upstream | 353015 | 20106282 ~ 20106355 (+) | True | trnam-cau_24 |
| unassigned_transcript_374 | other | upstream | 354919 | 20104376 ~ 20104451 (+) | True | trnam-cau_23 |
| TU44410 | other | downstream | 236478 | 20696672 ~ 20706846 (+) | True | G29961 |
| TU44534 | other | downstream | 658368 | 21118562 ~ 21142831 (+) | True | G30058 |
| TU44553 | other | downstream | 709055 | 21169249 ~ 21170595 (+) | False | LOC122342286 |
| TU44625 | other | downstream | 908449 | 21368643 ~ 21761178 (+) | False | LOC122342301 |
| TU44637 | other | downstream | 927999 | 21388193 ~ 21630120 (+) | True | G30119 |
