RNA id: XR_006250726.1


Basic Information

Item Value
RNA id XR_006250726.1
length 82
lncRNA type intronic
GC content 0.40
exon number 3
gene id LOC122343204
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22550101 ~ 22551350 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ctgctcACTGAATAAACTCAACGTTGATCATGGAGGAGAATCCAGGATTACAACAGGACTGAAGAAATATGAGTGTTTTCTc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250689.1 lncRNA upstream 6270 22542511 ~ 22543831 (+) True LOC122343169
XR_006250715.1 lncRNA upstream 8616 22540384 ~ 22541485 (+) True LOC122343193
TU45207 lncRNA upstream 17069 22532415 ~ 22533032 (+) True G30528
TU45205 lncRNA upstream 43909 22505255 ~ 22506192 (+) True G30526
XR_006250708.1 lncRNA upstream 130409 22417927 ~ 22419692 (+) True LOC122343186
TU45301 lncRNA downstream 252688 22804038 ~ 23246017 (+) True G30598
TU45303 lncRNA downstream 256638 22807988 ~ 23249868 (+) True G30599
TU45312 lncRNA downstream 302131 22853481 ~ 22869703 (+) True G30607
TU45317 lncRNA downstream 306940 22858290 ~ 22861570 (+) True G30609
TU45335 lncRNA downstream 455624 23006974 ~ 23126523 (+) True G30624
XM_043237291.1 mRNA upstream 103823 22434054 ~ 22446278 (+) False LOC122343018
XM_043237290.1 mRNA upstream 103823 22434059 ~ 22446278 (+) True LOC122343018
XM_043236104.1 mRNA upstream 144279 22404053 ~ 22405822 (+) True LOC122342312
XM_043236103.1 mRNA upstream 244953 22296897 ~ 22305148 (+) True LOC122342310
XM_043237344.1 mRNA upstream 442644 22105236 ~ 22107457 (+) True LOC122343041
XM_043237204.1 mRNA downstream 61765 22613115 ~ 22621886 (+) True LOC122342965
XM_043237292.1 mRNA downstream 110476 22661826 ~ 22673771 (+) True LOC122343019
XM_043237429.1 mRNA downstream 134352 22685702 ~ 22689679 (+) False LOC122343101
XM_043237428.1 mRNA downstream 134390 22685740 ~ 22689679 (+) True LOC122343101
XM_043237257.1 mRNA downstream 144450 22695800 ~ 22706494 (+) True LOC122342996
TU44785 other upstream 248582 22296897 ~ 22301519 (+) False LOC122342310
TU44767 other upstream 318177 22231470 ~ 22231924 (+) True G30218
TU44625 other upstream 788923 21368643 ~ 21761178 (+) False LOC122342301
XR_006250667.1 other downstream 110476 22661826 ~ 22682712 (+) False LOC122343019
TU45293 other downstream 226692 22778042 ~ 22779597 (+) False LOC122342317
TU45355 other downstream 577756 23129106 ~ 23130189 (+) True G30636
TU45351 other downstream 606209 23157559 ~ 23159756 (+) True G30632
TU45341 other downstream 612419 23163769 ~ 23167257 (+) False LOC122342321