Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006250753.1 |
| length | 672 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 4 |
| gene id | LOC122343307 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056702.1 |
| NCBI id | CM032071.1 |
| chromosome length | 29200999 |
| location | 2439495 ~ 2454289 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU37644 | lncRNA | upstream | 26911 | 2412063 ~ 2412584 (+) | True | G25334 |
| TU37642 | lncRNA | upstream | 28850 | 2408969 ~ 2410645 (+) | True | G25332 |
| TU37641 | lncRNA | upstream | 30558 | 2407571 ~ 2408937 (+) | True | G25331 |
| TU37640 | lncRNA | upstream | 34098 | 2405174 ~ 2405397 (+) | True | G25330 |
| TU37637 | lncRNA | upstream | 36821 | 2402445 ~ 2402674 (+) | True | G25327 |
| XR_006250604.1 | lncRNA | downstream | 207825 | 2662114 ~ 2663045 (+) | True | LOC122342588 |
| XR_006250564.1 | lncRNA | downstream | 212053 | 2666342 ~ 2679743 (+) | True | LOC122342427 |
| XR_006250552.1 | lncRNA | downstream | 232135 | 2686424 ~ 2719361 (+) | True | LOC122342395 |
| XR_006250553.1 | lncRNA | downstream | 232135 | 2686424 ~ 2719361 (+) | False | LOC122342395 |
| XR_006250772.1 | lncRNA | downstream | 272513 | 2726802 ~ 2787657 (+) | True | LOC122343412 |
| XM_043237518.1 | mRNA | upstream | 45054 | 2388979 ~ 2394441 (+) | True | ifrd1 |
| XM_043237924.1 | mRNA | upstream | 249747 | 2178532 ~ 2189748 (+) | False | LOC122343453 |
| XM_043237923.1 | mRNA | upstream | 249747 | 2178533 ~ 2189748 (+) | True | LOC122343453 |
| XM_043237015.1 | mRNA | upstream | 417185 | 2001089 ~ 2022310 (+) | True | utp20 |
| XM_043236224.1 | mRNA | upstream | 443959 | 1994240 ~ 1995536 (+) | True | lyrm5a |
| XM_043237879.1 | mRNA | downstream | 51657 | 2505946 ~ 2602501 (+) | True | foxp2 |
| XM_043237878.1 | mRNA | downstream | 83730 | 2538019 ~ 2602501 (+) | False | foxp2 |
| XM_043237880.1 | mRNA | downstream | 83730 | 2538019 ~ 2602501 (+) | False | foxp2 |
| XM_043237770.1 | mRNA | downstream | 168250 | 2622539 ~ 2641837 (+) | True | mdfic |
| XM_043236336.1 | mRNA | downstream | 392985 | 2847274 ~ 2862389 (+) | True | elk3 |
| TU37230 | other | upstream | 651399 | 1784292 ~ 1788096 (+) | True | LOC122342451 |
| TU37269 | other | upstream | 766536 | 1670512 ~ 1672959 (+) | True | LOC122343488 |
| TU37077 | other | upstream | 1148271 | 1288312 ~ 1291224 (+) | True | ndufa5 |
| TU36860 | other | upstream | 1773965 | 654092 ~ 665530 (+) | True | G24771 |
| TU36683 | other | upstream | 2065413 | 373527 ~ 374082 (+) | True | G24632 |
| TU37871 | other | downstream | 661219 | 3115508 ~ 3117988 (+) | True | ninj2 |
| XR_006250571.1 | other | downstream | 665240 | 3119529 ~ 3306758 (+) | False | erc1b |
| unassigned_transcript_298 | other | downstream | 984842 | 3439131 ~ 3439654 (+) | True | LOC122342808 |
| unassigned_transcript_299 | other | downstream | 986623 | 3440912 ~ 3441500 (+) | True | LOC122342809 |
| unassigned_transcript_300 | other | downstream | 992769 | 3447058 ~ 3447574 (+) | True | LOC122343393 |
