RNA id: XR_006250801.1



Basic Information


Item Value
RNA id XR_006250801.1
length 119
RNA type rRNA
GC content 0.50
exon number 1
gene id LOC122343539
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 16003088 ~ 16003206 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


acttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctattaagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42859 lncRNA downstream 74188 15928143 ~ 15928900 (-) True G28897
TU42857 lncRNA downstream 159349 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 269205 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 347907 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 557859 15443764 ~ 15445229 (-) True LOC122342747
TU42891 lncRNA upstream 375494 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 408654 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 408654 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 409321 16412527 ~ 16420139 (-) True G28935
TU42950 lncRNA upstream 457556 16460762 ~ 16461511 (-) True G28966
XM_043236016.1 mRNA downstream 322970 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 323064 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 323064 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 329854 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 338782 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 474585 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 481361 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 534774 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 569921 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 707318 16710524 ~ 16724794 (-) False LOC122343211
XR_006250839.1 other downstream 2256 16000714 ~ 16000832 (-) True LOC122343849
XR_006250816.1 other downstream 4622 15998348 ~ 15998466 (-) True LOC122343667
XR_006250815.1 other downstream 6212 15996758 ~ 15996876 (-) True LOC122343656
XR_006250837.1 other downstream 7402 15995568 ~ 15995686 (-) True LOC122343848
XR_006250835.1 other downstream 13752 15989218 ~ 15989336 (-) True LOC122343846
XR_006250797.1 other upstream 1065 16004271 ~ 16004389 (-) True LOC122343535
XR_006250889.1 other upstream 2254 16005460 ~ 16005578 (-) True LOC122343907
XR_006250840.1 other upstream 4640 16007846 ~ 16007964 (-) True LOC122343850
XR_006250907.1 other upstream 6627 16009833 ~ 16009951 (-) True LOC122343927
XR_006250813.1 other upstream 7809 16011015 ~ 16011133 (-) True LOC122343643

Expression Profile