RNA id: XR_006250803.1



Basic Information


Item Value
RNA id XR_006250803.1
length 119
RNA type rRNA
GC content 0.52
exon number 1
gene id LOC122343552
representative True

Chromosome Information


Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15914490 ~ 15914608 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42857 lncRNA downstream 70751 15843405 ~ 15843739 (-) True G28895
TU42849 lncRNA downstream 180607 15733363 ~ 15733883 (-) True G28887
TU42824 lncRNA downstream 259309 15565419 ~ 15655181 (-) True G28870
XR_006250641.1 lncRNA downstream 469261 15443764 ~ 15445229 (-) True LOC122342747
TU42788 lncRNA downstream 496252 15416856 ~ 15418238 (-) True G28850
TU42859 lncRNA upstream 13535 15928143 ~ 15928900 (-) True G28897
TU42891 lncRNA upstream 464092 16378700 ~ 16383670 (-) True G28916
TU42910 lncRNA upstream 497252 16411860 ~ 16419956 (-) True G28933
TU42913 lncRNA upstream 497252 16411860 ~ 16419956 (-) False G28933
TU42916 lncRNA upstream 497919 16412527 ~ 16420139 (-) True G28935
XM_043236016.1 mRNA downstream 234372 15674819 ~ 15680118 (-) False tmem19
XM_043236018.1 mRNA downstream 234466 15674819 ~ 15680024 (-) False tmem19
XM_043236017.1 mRNA downstream 234466 15674819 ~ 15680024 (-) True tmem19
XM_043236424.1 mRNA downstream 241256 15664443 ~ 15673234 (-) True zgc:171422
XM_043236426.1 mRNA downstream 250184 15656075 ~ 15664306 (-) False slc37a3
XM_043236543.1 mRNA upstream 563183 16477791 ~ 16483176 (-) True LOC122342598
XM_043237033.1 mRNA upstream 569959 16484567 ~ 16498839 (-) True LOC122342885
XM_043236534.1 mRNA upstream 623372 16537980 ~ 16542902 (-) True LOC122342596
XM_043236544.1 mRNA upstream 658519 16573127 ~ 16593094 (-) True LOC122342599
XM_043237521.1 mRNA upstream 795916 16710524 ~ 16724794 (-) False LOC122343211
XR_006250830.1 other downstream 280 15914092 ~ 15914210 (-) True LOC122343813
XR_006250829.1 other downstream 16786 15897586 ~ 15897704 (-) True LOC122343802
XR_006250828.1 other downstream 17186 15897186 ~ 15897304 (-) True LOC122343791
XR_006250827.1 other downstream 21155 15893217 ~ 15893335 (-) True LOC122343780
XR_006250826.1 other downstream 21550 15892822 ~ 15892940 (-) True LOC122343769
XR_006250831.1 other upstream 1472 15916080 ~ 15916198 (-) True LOC122343825
XR_006250832.1 other upstream 1868 15916476 ~ 15916594 (-) True LOC122343837
XR_006250833.1 other upstream 4238 15918846 ~ 15918964 (-) True LOC122343844
XR_006250909.1 other upstream 6231 15920839 ~ 15920957 (-) True LOC122343929
TU42860 other upstream 17886 15932494 ~ 15932864 (-) True G28898

Expression Profile